ID F0SDK3_PSESL Unreviewed; 475 AA.
AC F0SDK3;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ADY50730.1};
GN OrderedLocusNames=Pedsa_0144 {ECO:0000313|EMBL:ADY50730.1};
OS Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / CCUG
OS 39354 / LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pseudopedobacter.
OX NCBI_TaxID=762903 {ECO:0000313|EMBL:ADY50730.1, ECO:0000313|Proteomes:UP000000310};
RN [1] {ECO:0000313|EMBL:ADY50730.1, ECO:0000313|Proteomes:UP000000310}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 /
RC NCIMB 13643 {ECO:0000313|Proteomes:UP000000310};
RX PubMed=22180808; DOI=10.4056/sigs.2154937;
RA Liolios K., Sikorski J., Lu M., Nolan M., Lapidus A., Lucas S., Hammon N.,
RA Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S.,
RA Huntemann M., Ivanova N., Pagani I., Mavromatis K., Ovchinikova G.,
RA Pati A., Chen A., Palaniappan K., Land M., Hauser L., Brambilla E.M.,
RA Kotsyurbenko O., Rohde M., Tindall B.J., Abt B., Goker M., Detter J.C.,
RA Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P.,
RA Kyrpides N.C.;
RT "Complete genome sequence of the gliding, heparinolytic Pedobacter saltans
RT type strain (113).";
RL Stand. Genomic Sci. 5:30-40(2011).
RN [2] {ECO:0000313|Proteomes:UP000000310}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 /
RC NCIMB 13643 {ECO:0000313|Proteomes:UP000000310};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Ovchinnikova G., Lu M.,
RA Detter J.C., Han C., Land M., Hauser L., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Brambilla E.,
RA Klenk H.-P., Eisen J.A.;
RT "The complete genome of Pedobacter saltans DSM 12145.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|RuleBase:RU362097};
CC Lipid-anchor {ECO:0000256|RuleBase:RU362097}.
CC -!- SIMILARITY: Belongs to the outer membrane factor (OMF) (TC 1.B.17)
CC family. {ECO:0000256|ARBA:ARBA00007613, ECO:0000256|RuleBase:RU362097}.
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DR EMBL; CP002545; ADY50730.1; -; Genomic_DNA.
DR RefSeq; WP_013631233.1; NC_015177.1.
DR AlphaFoldDB; F0SDK3; -.
DR STRING; 762903.Pedsa_0144; -.
DR KEGG; psn:Pedsa_0144; -.
DR eggNOG; COG1538; Bacteria.
DR HOGENOM; CLU_012817_13_3_10; -.
DR OrthoDB; 9770517at2; -.
DR Proteomes; UP000000310; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015562; F:efflux transmembrane transporter activity; IEA:InterPro.
DR Gene3D; 1.20.1600.10; Outer membrane efflux proteins (OEP); 1.
DR Gene3D; 2.20.200.10; Outer membrane efflux proteins (OEP); 1.
DR InterPro; IPR003423; OMP_efflux.
DR InterPro; IPR010131; RND_efflux_OM_lipoprot_NodT.
DR NCBIfam; TIGR01845; outer_NodT; 1.
DR PANTHER; PTHR30203; OUTER MEMBRANE CATION EFFLUX PROTEIN; 1.
DR PANTHER; PTHR30203:SF30; OUTER MEMBRANE PROTEIN-RELATED; 1.
DR Pfam; PF02321; OEP; 2.
DR SUPFAM; SSF56954; Outer membrane efflux proteins (OEP); 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Lipoprotein {ECO:0000256|RuleBase:RU362097, ECO:0000313|EMBL:ADY50730.1};
KW Membrane {ECO:0000256|RuleBase:RU362097};
KW Palmitate {ECO:0000256|RuleBase:RU362097};
KW Reference proteome {ECO:0000313|Proteomes:UP000000310};
KW Transmembrane {ECO:0000256|RuleBase:RU362097};
KW Transmembrane beta strand {ECO:0000256|RuleBase:RU362097}.
FT COILED 65..92
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 436..463
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 475 AA; 52955 MW; C8A562BBCC2537DE CRC64;
MFICKRLSWL LFTGLAIVGC KVPKLTEQNA NIALPKTYDT LQDSLSSANL KWQQFFTDPY
LVRLIDTAIR NNQELQITLQ EIEIARNEAR IKNSQIFPSV GVKVGVGLEK VGRYTSQGAG
DASTDMTEGK PVPDPLADFG IMANANWEVD IWKKLHDAKK AALSRYLATI EGRNFVLTNL
IAEVANTYYE LLALDSQLGI VRENVKIQTD ALRVVKAQKD AGRTNELAVK KFNAEVLKTS
SMEFDIRQQI VETENRLNLL LGRYPKTIER NRADFTGLSP LAVKNGIPSQ LLANRPDIQQ
AEQELKAAKL DVKVARAEFY PSLGISAGLG LQAFKPSYLF TLPESMLYAI AGDLATPIIN
RGAIKAEFAN ANARQIQALY NYERTVLNAY LEVANRLSSI SNLEKAYDLK SQQVNVLSQS
IEISNDLFRS AHADYFEVLM TQRDALEAKL ELIETKKNQL MATVNVYKAL GGGWK
//
