ID F0YAG6_AURAN Unreviewed; 1012 AA.
AC F0YAG6;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 68.
DE SubName: Full=Uncharacterized protein RUV1 {ECO:0000313|EMBL:EGB07927.1};
GN Name=RUV1 {ECO:0000313|EMBL:EGB07927.1};
GN ORFNames=AURANDRAFT_26802 {ECO:0000313|EMBL:EGB07927.1};
OS Aureococcus anophagefferens (Harmful bloom alga).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Pelagophyceae; Pelagomonadales;
OC Aureococcus.
OX NCBI_TaxID=44056 {ECO:0000313|Proteomes:UP000002729};
RN [1] {ECO:0000313|EMBL:EGB07927.1, ECO:0000313|Proteomes:UP000002729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP 1984 {ECO:0000313|Proteomes:UP000002729};
RX PubMed=21368207; DOI=10.1073/pnas.1016106108;
RA Gobler C.J., Berry D.L., Dyhrman S.T., Wilhelm S.W., Salamov A.,
RA Lobanov A.V., Zhang Y., Collier J.L., Wurch L.L., Kustka A.B., Dill B.D.,
RA Shah M., VerBerkmoes N.C., Kuo A., Terry A., Pangilinan J., Lindquist E.A.,
RA Lucas S., Paulsen I.T., Hattenrath-Lehmann T.K., Talmage S.C., Walker E.A.,
RA Koch F., Burson A.M., Marcoval M.A., Tang Y.Z., Lecleir G.R., Coyne K.J.,
RA Berg G.M., Bertrand E.M., Saito M.A., Gladyshev V.N., Grigoriev I.V.;
RT "Niche of harmful alga Aureococcus anophagefferens revealed through
RT ecogenomics.";
RL Proc. Natl. Acad. Sci. U.S.A. 108:4352-4357(2011).
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. ISWI subfamily.
CC {ECO:0000256|ARBA:ARBA00009687}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; GL833129; EGB07927.1; -; Genomic_DNA.
DR RefSeq; XP_009037300.1; XM_009039052.1.
DR AlphaFoldDB; F0YAG6; -.
DR EnsemblProtists; EGB07927; EGB07927; AURANDRAFT_26802.
DR GeneID; 20220260; -.
DR KEGG; aaf:AURANDRAFT_26802; -.
DR eggNOG; KOG0385; Eukaryota.
DR InParanoid; F0YAG6; -.
DR OMA; HLWENCG; -.
DR OrthoDB; 5482994at2759; -.
DR Proteomes; UP000002729; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0031491; F:nucleosome binding; IEA:InterPro.
DR CDD; cd00167; SANT; 2.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR015194; ISWI_HAND-dom.
DR InterPro; IPR036306; ISWI_HAND-dom_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR015195; SLIDE.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45623; CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED; 1.
DR PANTHER; PTHR45623:SF49; SWI_SNF RELATED, MATRIX ASSOCIATED, ACTIN DEPENDENT REGULATOR OF CHROMATIN, SUBFAMILY A, MEMBER 1; 1.
DR Pfam; PF09110; HAND; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF09111; SLIDE; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00717; SANT; 2.
DR SUPFAM; SSF101224; HAND domain of the nucleosome remodeling ATPase ISWI; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50090; MYB_LIKE; 1.
DR PROSITE; PS51293; SANT; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000002729}.
FT DOMAIN 139..304
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 434..585
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 778..833
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT DOMAIN 888..943
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 952..1012
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1012 AA; 114869 MW; 1E4F3C775ED5D8A3 CRC64;
MGTRGGGGTV VAPPPKKAPK KQDAAFEAAR AAQKERLANM KEFGTTMEGV DVQQQRDKRL
NYLMAQSEVF SHFMEENSDG GFKRAKAKAG RTRMTESAED ANLMKTAQSK LRVTRVQTQP
SIITAKMRPY QLEGLNWLVK LHDNGINGIL ADEMGLGKTL QSISLLAYLH ETRGITGPHI
CIVPKSVTNN WMRELRKWCP TLRPVKLLGS KDERARVLRE DLRPGTFDVL VTSYEGILKE
KAGLMKIQWQ YLLIDEAHRI KNPNSSLSKI VRLIPTQFRL LITGTPLQNN LNELWALLNF
LLPDIFASEA DFETWFSLGD ADAKDNVVKK LHTVLRPFML RRIKKDVEKD LPPKREVKLY
IGMTEMQRLW YTKILSKDAH TLNALGGPDR VQLLNILMQL RKVCNHPYLF EGAEPGPPFM
DGPHLWENTG KLVLMSKLLP KLMAQDSRVL IFSQMTRMLD ILEDYMRLNQ YKYCRIDGST
SGDDRDSQMD VFNAPGSEKF AFLLSTRAGG LGINLATADI VVLYDSDWNP QVDLQAMDRA
HRIGQTKPVT VFRFVTEGTV EEKIIERADR KLFLDAAVIQ QGRLAEQNAA LGKNDLMAMV
RFGADEIFAS KAKTITDEDI DTLLKRGEER TQEQASKIQS DVQHNLANFS LTTMEEPEGS
LFNFEGENYK GAKGGGGLMI NLPQRERKRN YDVDEYFRDA LRQGDKPAVA REPRKRRGPP
MHDFQFFNRA ELEVLLAKED ELAGKKHEAR ADEMEATLET AYELPVKEAV RKERLLKEGF
GDWTRKDLRA FLNAMERHGR GDVDAVARET ANETGKTDAD VRRYHATFWK KHKDIADWER
LVDKVEKGEK RLQRSQEIRS ALADKVARHP KPWECLPINY GASRGKVWTE EEDAFLVNMM
HTYGYGNWER IRVEIRNAWQ FNFDWFFKSR NAQELNRRAD LLIRLVEKEN EDHRKDAPGA
APAGDAAPAP AKKGRKPAGR PKKRAAEAAT GESPDAKQAK QEGGDAPMAD AA
//
