ID F1ZBV1_9SPHN Unreviewed; 300 AA.
AC F1ZBV1;
DT 31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 31-MAY-2011, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE SubName: Full=Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:EGD57973.1};
GN ORFNames=Y88_3303 {ECO:0000313|EMBL:EGD57973.1};
OS Novosphingobium nitrogenifigens DSM 19370.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=983920 {ECO:0000313|EMBL:EGD57973.1, ECO:0000313|Proteomes:UP000004728};
RN [1] {ECO:0000313|EMBL:EGD57973.1, ECO:0000313|Proteomes:UP000004728}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19370 {ECO:0000313|EMBL:EGD57973.1,
RC ECO:0000313|Proteomes:UP000004728};
RX PubMed=22156397; DOI=10.1128/JB.06381-11;
RA Strabala T.J., Macdonald L., Liu V., Smit A.M.;
RT "Draft Genome Sequence of Novosphingobium nitrogenifigens Y88T.";
RL J. Bacteriol. 194:201-201(2012).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGD57973.1}.
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DR EMBL; AEWJ01000051; EGD57973.1; -; Genomic_DNA.
DR RefSeq; WP_008070548.1; NZ_GL876934.1.
DR AlphaFoldDB; F1ZBV1; -.
DR STRING; 983920.Y88_3303; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_6_4_5; -.
DR InParanoid; F1ZBV1; -.
DR OrthoDB; 8679465at2; -.
DR Proteomes; UP000004728; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30346:SF0; HCA OPERON TRANSCRIPTIONAL ACTIVATOR HCAR; 1.
DR PANTHER; PTHR30346; TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000004728}.
FT DOMAIN 5..63
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 300 AA; 32105 MW; 9B1863A776CFAF91 CRC64;
MTIAVSTRHI RVFLAVAAHG STAAAARALA LSQPSVSVAL RELETLLGQP LFLRQSARGL
APTAFGLRKL GEAREIAARL ATFARTEAAD EGPAGEVTFG YFSTLGPLYV PQILRRMADR
HPQIHVTLRE GDLSDLNRLI ETGTIELALS YAVSPSPHAA TETLAELEPH AVLPAGHRLA
ALPSVPVALL AQEPFILIDL PQSREFLLSV FRAEGREARI AYRTPSIDMA LGMVAAGLGV
SVLVTRQTAS HACEDAAIRR LPLRDNRVRQ GVVLARPAQH QLTGPARALA TCIREVVAEA
//
