ID F4GDD8_ALIDK Unreviewed; 538 AA.
AC F4GDD8;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE RecName: Full=diguanylate cyclase {ECO:0000256|ARBA:ARBA00012528};
DE EC=2.7.7.65 {ECO:0000256|ARBA:ARBA00012528};
GN OrderedLocusNames=Alide2_3642 {ECO:0000313|EMBL:AEB85967.1};
OS Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Alicycliphilus.
OX NCBI_TaxID=596154 {ECO:0000313|EMBL:AEB85967.1, ECO:0000313|Proteomes:UP000007938};
RN [1] {ECO:0000313|EMBL:AEB85967.1, ECO:0000313|Proteomes:UP000007938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14773 / CIP 107495 / K601
RC {ECO:0000313|Proteomes:UP000007938};
RX PubMed=21742888; DOI=10.1128/JB.00365-11;
RA Oosterkamp M.J., Veuskens T., Plugge C.M., Langenhoff A.A., Gerritse J.,
RA van Berkel W.J., Pieper D.H., Junca H., Goodwin L.A., Daligault H.E.,
RA Bruce D.C., Detter J.C., Tapia R., Han C.S., Land M.L., Hauser L.J.,
RA Smidt H., Stams A.J.;
RT "Genome Sequences of Alicycliphilus denitrificans Strains BC and K601T.";
RL J. Bacteriol. 193:5028-5029(2011).
RN [2] {ECO:0000313|EMBL:AEB85967.1, ECO:0000313|Proteomes:UP000007938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14773 / CIP 107495 / K601
RC {ECO:0000313|Proteomes:UP000007938};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Zeytun A., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Oosterkamp M.,
RA Pieper D., van Berkel W., Langenhoff A., Smidt H., Stams A., Woyke T.;
RT "Complete sequence of chromosome of Alicycliphilus denitrificans K601.";
RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP002657; AEB85967.1; -; Genomic_DNA.
DR RefSeq; WP_013722817.1; NC_015422.1.
DR AlphaFoldDB; F4GDD8; -.
DR STRING; 596154.Alide2_3642; -.
DR KEGG; adk:Alide2_3642; -.
DR eggNOG; COG0834; Bacteria.
DR eggNOG; COG3706; Bacteria.
DR HOGENOM; CLU_037831_0_0_4; -.
DR OrthoDB; 9813903at2; -.
DR Proteomes; UP000007938; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001638; Solute-binding_3/MltF_N.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR45138:SF9; DIGUANYLATE CYCLASE DGCM-RELATED; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00497; SBP_bac_3; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00062; PBPb; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000007938};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 318..338
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 403..538
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT COILED 338..375
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 538 AA; 60355 MW; D39282DF24FD629C CRC64;
MAGEPLMGEK RWSGHALWRH IGSRGLGHLW RALCVALCAW CIAPLAQAAA CEGGQHVRLT
RPVEFSAEDL AYFRAMAPLR VLSADAPPMS RYDEQRRTYT GISVDVWCFI AARLGLRYEL
IPGRDQTVAQ KILQVQEGAA DVFIPLSLQS ERAQRGLFTL PYYESYYAVI ARKGWRLPIR
DIVDLAQYRV GVVRGVALEP TLKEIVPPHQ LFSFDETSSA GLFLALRDGS IDVAVFNKSI
FAEKRYLHEY FDLEDVLTLY GNPRAYRFYF SPTPQHERVV AAFDRYLAAM DVTESIAVHE
EGERQFIERY VAQRGQRIFL QVASVSAVVL ALVLYLSLRR YRRLVRLLER SNSQIRRQQQ
ALQAANQELE RQSQTDGLTG LANRREFDHA LRREQARQQR TGAPLSLLMV DVDHFKCVND
HYGHAMGDDY LRAIARVLKT AVGRPTDLVA RYGGEEFVCL LPDTAAEDAL KVAERIRQGV
AELGLPNALA AIPRLTLSIG IATASGTSAA LQQLLAQADT QLYAAKHAGR DRIHAVVL
//
