ID F4I1X9_ARATH Unreviewed; 412 AA.
AC F4I1X9;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 24-JAN-2024, entry version 71.
DE SubName: Full=Coiled-coil protein {ECO:0000313|EMBL:AEE33304.1};
GN OrderedLocusNames=At1g55830 {ECO:0000313|Araport:AT1G55830,
GN ECO:0000313|EMBL:AEE33304.1};
GN ORFNames=F20N2.20 {ECO:0000313|EMBL:AEE33304.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AEE33304.1, ECO:0000313|Proteomes:UP000006548};
RN [1] {ECO:0000313|EMBL:AEE33304.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; CP002684; AEE33304.1; -; Genomic_DNA.
DR RefSeq; NP_175979.2; NM_104460.3.
DR AlphaFoldDB; F4I1X9; -.
DR SMR; F4I1X9; -.
DR ProteomicsDB; 204380; -.
DR EnsemblPlants; AT1G55830.1; AT1G55830.1; AT1G55830.
DR GeneID; 842033; -.
DR Gramene; AT1G55830.1; AT1G55830.1; AT1G55830.
DR Araport; AT1G55830; -.
DR TAIR; AT1G55830; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; F4I1X9; baseline and differential.
DR InterPro; IPR008530; CCDC22.
DR InterPro; IPR048348; CCDC22_CC.
DR PANTHER; PTHR15668:SF4; COILED-COIL DOMAIN-CONTAINING PROTEIN 22; 1.
DR PANTHER; PTHR15668; JM1 PROTEIN; 1.
DR Pfam; PF05667; CCDC22_CC; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:F4I1X9,
KW ECO:0007829|ProteomicsDB:F4I1X9};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT DOMAIN 141..387
FT /note="CCDC22 coiled-coil"
FT /evidence="ECO:0000259|Pfam:PF05667"
FT REGION 85..136
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 87..109
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 110..134
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 412 AA; 47957 MW; 870E872DC09064B5 CRC64;
MCCLRQFLHP SEDDSYRLVR FLVERLSEIS EGRKTLTAGD IASRPKMETF RDISDDMMVN
EDKDETFDMH IQKVEAVLKD LTMTSEKSHS SDSLAKNTSA NVDFSSQKTD DPVTDVRSDL
SLRDSSRCEE NSYEDPFETN YETVELQNQH DVLLEELESG SSQLCSLESE LELLQMAAER
LLDDKKPGGS YLEQLNQQLV VKRCNIMDLK KQWDDVRLTL ETKKLLLLDQ LHVEEPEAKE
KFHKLRKTEL DLQSLSSEIQ KREDERCNLY NELERQPKAA PRKSYIHGIK EITKNSRKLD
TDIQRISGET RELQLEKNSI QERLHRSYAV VDEMVTREVK KDPAVRQVYK LLTSIHSIFE
QISEKILMTD RFRRETVDYE KKLGSITARG MSLEKLQADL DAIRKENESL KK
//
