ID F4JXI7_ARATH Unreviewed; 449 AA.
AC F4JXI7;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE RecName: Full=starch synthase {ECO:0000256|ARBA:ARBA00012588};
DE EC=2.4.1.21 {ECO:0000256|ARBA:ARBA00012588};
GN OrderedLocusNames=At5g65685 {ECO:0000313|Araport:AT5G65685,
GN ECO:0000313|EMBL:AED98090.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AED98090.1, ECO:0000313|Proteomes:UP000006548};
RN [1] {ECO:0000313|EMBL:AED98090.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130714; DOI=10.1038/35048507;
RG Kazusa DNA Research Institute;
RG Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG European Union Arabidopsis Genome Sequencing Consortium;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D.,
RA Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B.,
RA Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H.,
RA Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S.,
RA Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J.,
RA Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H.,
RA Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- PATHWAY: Glycan biosynthesis; starch biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004727}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC {ECO:0000256|ARBA:ARBA00004229}.
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DR EMBL; CP002688; AED98090.1; -; Genomic_DNA.
DR RefSeq; NP_001190623.1; NM_001203694.1.
DR AlphaFoldDB; F4JXI7; -.
DR SMR; F4JXI7; -.
DR ProteomicsDB; 211755; -.
DR EnsemblPlants; AT5G65685.2; AT5G65685.2; AT5G65685.
DR GeneID; 836698; -.
DR Gramene; AT5G65685.2; AT5G65685.2; AT5G65685.
DR KEGG; ath:AT5G65685; -.
DR Araport; AT5G65685; -.
DR TAIR; AT5G65685; -.
DR UniPathway; UPA00152; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; F4JXI7; baseline and differential.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0016757; F:glycosyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0019252; P:starch biosynthetic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.40.50.2000; Glycogen Phosphorylase B; 1.
DR InterPro; IPR013534; Starch_synth_cat_dom.
DR PANTHER; PTHR46083; -; 1.
DR PANTHER; PTHR46083:SF3; UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN; 1.
DR Pfam; PF08323; Glyco_transf_5; 1.
DR SUPFAM; SSF53756; UDP-Glycosyltransferase/glycogen phosphorylase; 1.
PE 1: Evidence at protein level;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Glycosyltransferase {ECO:0000256|ARBA:ARBA00022676};
KW Proteomics identification {ECO:0007829|PeptideAtlas:F4JXI7,
KW ECO:0007829|ProteomicsDB:F4JXI7};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Starch biosynthesis {ECO:0000256|ARBA:ARBA00022922};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 181..402
FT /note="Starch synthase catalytic"
FT /evidence="ECO:0000259|Pfam:PF08323"
FT COILED 67..108
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 449 AA; 50936 MW; EEFE7887E2D48426 CRC64;
MQATANLPTI WNLSLHFSFC SVRSEFFRSE GHEEFDNSQK SLGQSSITKE AKHKDIWNLF
REAQKNIMIL NKQRLAAVDE LEQLKKDKEE LLERINQLEA ESQIVIKKDK SSLFWELLLR
IDSMVINGLV NIEEASSMRK LVKEHEANIS VFPLDVLQQG DAEILAELRR FTNKGKRNGL
HVIHICTEMA PLVSVGPLAS YITGLSCALQ EEGYMVEVIL PKYSTLDLDE IEGLREIEAD
AYSYFDGQLH ANRIWNGVVS GIGVTLIQPV YYSSMFSRDK VYGYQDDFDR FAYFSRASLD
YIAKSGKQPD VLHIHNWQTA IVGPLFWDVF VNQGLEGTRI LLTCQDFDKG LVPPEKLELC
GLDPAELHRL DRLQDNTNPH FVNILKGGVV YSNKVVIMSS SHSSIPGLEP TLAIHKDKLF
FAPFGMDNSM EKDLCCDLHV SAYTSIKNL
//
