ID F6DD37_THICA Unreviewed; 694 AA.
AC F6DD37;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE SubName: Full=General secretion pathway protein D {ECO:0000313|EMBL:AEG31773.1};
GN OrderedLocusNames=Thicy_1006 {ECO:0000313|EMBL:AEG31773.1};
OS Thiomicrospira cyclica (strain DSM 14477 / JCM 11371 / ALM1)
OS (Thioalkalimicrobium cyclicum).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC Piscirickettsiaceae; Thiomicrospira.
OX NCBI_TaxID=717773 {ECO:0000313|EMBL:AEG31773.1, ECO:0000313|Proteomes:UP000009232};
RN [1] {ECO:0000313|EMBL:AEG31773.1, ECO:0000313|Proteomes:UP000009232}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14477 / JCM 11371 / ALM1
RC {ECO:0000313|Proteomes:UP000009232};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Mikhailova N., Davenport K., Han C., Tapia R., Land M.,
RA Hauser L., Kyrpides N., Ivanova N., Pagani I., Kappler U., Woyke T.;
RT "Complete sequence of Thioalkalimicrobium cyclicum ALM1.";
RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004442, ECO:0000256|RuleBase:RU004004}.
CC Membrane {ECO:0000256|ARBA:ARBA00004370}.
CC -!- SIMILARITY: Belongs to the bacterial secretin family. GSP D subfamily.
CC {ECO:0000256|ARBA:ARBA00006980}.
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DR EMBL; CP002776; AEG31773.1; -; Genomic_DNA.
DR RefSeq; WP_013835550.1; NC_015581.1.
DR AlphaFoldDB; F6DD37; -.
DR STRING; 717773.Thicy_1006; -.
DR KEGG; tcy:Thicy_1006; -.
DR eggNOG; COG1450; Bacteria.
DR HOGENOM; CLU_006756_1_1_6; -.
DR OrthoDB; 9775455at2; -.
DR Proteomes; UP000009232; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015627; C:type II protein secretion system complex; IEA:InterPro.
DR GO; GO:0015628; P:protein secretion by the type II secretion system; IEA:InterPro.
DR Gene3D; 3.30.1370.120; -; 3.
DR InterPro; IPR049371; GspD-like_N0.
DR InterPro; IPR001775; GspD/PilQ.
DR InterPro; IPR005644; NolW-like.
DR InterPro; IPR038591; NolW-like_sf.
DR InterPro; IPR004846; T2SS/T3SS_dom.
DR InterPro; IPR013356; T2SS_GspD.
DR NCBIfam; TIGR02517; type_II_gspD; 1.
DR PANTHER; PTHR30332; PROBABLE GENERAL SECRETION PATHWAY PROTEIN D; 1.
DR PANTHER; PTHR30332:SF24; SECRETIN XPSD; 1.
DR Pfam; PF00263; Secretin; 1.
DR Pfam; PF03958; Secretin_N; 3.
DR Pfam; PF21305; type_II_gspD_N0; 1.
DR PRINTS; PR00811; BCTERIALGSPD.
DR PRINTS; PR01032; PHAGEIV.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00022452};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000009232};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|RuleBase:RU004004}.
FT DOMAIN 33..101
FT /note="GspD-like N0"
FT /evidence="ECO:0000259|Pfam:PF21305"
FT DOMAIN 125..182
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 189..255
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 262..358
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 440..603
FT /note="Type II/III secretion system secretin-like"
FT /evidence="ECO:0000259|Pfam:PF00263"
FT REGION 646..694
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 656..682
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 694 AA; 74801 MW; E96B5F9D0D45D2D2 CRC64;
MLKSQIGRFS LLVGLFIWAM MIPRVQAAEI QQNFRDVEIA NVIEAVAKVT GQNFIIDPRV
RGKVTLIAPQ AMSGDALYQT LLAILNVHGF VAIPSGEVIK VVPVNLARDQ LPYVSPQDVG
EAWVTEVVSV NHVEAAKLVA ILRPLVAREG HLVALADSNR LIVTDTVDGL NRIKAILRQI
DINTHAEFEV IRPQHAPADE LVRTLRAVQG VSGAGQNVLG ARINFDERSN RIIVSGDIDD
RLMVRALIAD LDVPLSRDGS IQVVYLQYAK ATDLVPILQQ LASQEGFRGG LESVAGESAT
SEDASSRPAN QVSFEKSMMT SVSIQADERM NAIVMSAPAD ILEGLKSVIR QLDIRRAQVL
IEAIIVELSE ARAAQLGVDW AAFGASGVGL FNLSGNLPGV ATAVGTGNIQ ALPDGFPGRG
VTAAVGEVRG NSGWGALINA LRSDTGANIL STPTLLTLDN ESAEIIVGRE VPFRTGSFTT
SAGGTNPFTT IERKSVGLKL RVKPQINQGN EVYLEIENEI SDVLPGDTPD LLQTSKRELR
TSVIVGDGDT IVLGGLLSER ETDTRNEVPG LGSIPGLGAL FRNQSSQREK VNLMIFLRPV
IIRDQTMGSF HSRQKYGQMQ EQQQTILRHS PSGLLEGLRP ELPTLEQLDD GLATSSEKGV
ISTMPRRDSV IEQSTSSSSR AVERRDSSLE VLGF
//
