ID F6GZB2_VITVI Unreviewed; 661 AA.
AC F6GZB2;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=VIT_00s0455g00030 {ECO:0000313|EMBL:CCB45298.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; FN595005; CCB45298.1; -; Genomic_DNA.
DR AlphaFoldDB; F6GZB2; -.
DR PaxDb; 29760-VIT_00s0455g00030-t01; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_8_1; -.
DR InParanoid; F6GZB2; -.
DR Proteomes; UP000009183; Unassembled WGS sequence, unordered.
DR ExpressionAtlas; F6GZB2; baseline and differential.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 5.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 153..187
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 254..288
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 289..323
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 355..389
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 390..424
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 569..661
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 661 AA; 74244 MW; 1D735D9F3487C3A5 CRC64;
MRLRNSTLFN AAVIRKILVR SPPSGFATIH APAAPFSDSN DSEVEDGDAA SFCVFQDKDL
LRKSQSDGGT GLYALDLIQR GSLVPDYNLY SKLLKECTRL GKVEQGRIVH AHLVDSHFLD
NHLVLQNIIV NMYAKCGCLD DARRMFDEMP TKDMVTWTAL IAGFSQNNRP RDALLLFPQM
LRLGFQPNHF TLSSLLKASG SEHGLDPGTQ LHAFCLKYGY QSSVYVGSAL VDMYARCGHM
DAAQLAFDGM PTKSEVSWNA LISGHARKGE GEHALHLLWK MQRKNFQPTH FTYSSVLSAC
ASIGALEQGK WVHAHMIKSG LKLIAFIGNT LLDMYAKAGS IDDAKRVFDR LVKPDVVSWN
TMLTGCAQHG LGKETLDRFE QMLRIGIEPN EISFLCVLTA CSHSGLLDEG LYYFELMKKY
KVEPDVPHYV TFVDLLGRVG LLDRAERFIR EMPIEPTAAV WGALLGACRM HKNMELGVYA
AERAFELDPH DSGPRMLLSN IYASAGRWRD VAKVRKMMKE SGVKKQPACS WVEIENAVHL
FVANDETHPR IKEIRGKWEE ISGKIKEIGY VPDTSHVLLF VDQQEREEKL QYHSEKLALA
FALLNTPTGS PIRIKKNIRV CGDCHAAIKF VSKVVDREII VRDTNRFHRF RDGSCSCGDY
W
//
