ID F6H8V1_VITVI Unreviewed; 511 AA.
AC F6H8V1;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_05s0049g02300 {ECO:0000313|EMBL:CCB48644.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB48644.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
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DR EMBL; FN595496; CCB48644.1; -; Genomic_DNA.
DR AlphaFoldDB; F6H8V1; -.
DR PaxDb; 29760-VIT_05s0049g02300-t01; -.
DR EnsemblPlants; Vitvi05g00864_t001; Vitvi05g00864_P001; Vitvi05g00864.
DR Gramene; Vitvi05g00864_t001; Vitvi05g00864_P001; Vitvi05g00864.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_1_1; -.
DR InParanoid; F6H8V1; -.
DR Proteomes; UP000009183; Chromosome 5.
DR ExpressionAtlas; F6H8V1; baseline and differential.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 44..78
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 184..219
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 287..321
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 511 AA; 56729 MW; 9C312424CD8050B9 CRC64;
MCSSDVLPDD FTLSTLSKVS SELGALFSGK SIHGKSIRIG FVSDTVVANS IMSMYCKCGN
FEESRKVFDE MTIRNSGSWN VLIAGYAVSG NCNFREETWE FVKQMQMDEV RPDAYTISSL
LPLCDGDKGK WDYGRELHCY IVKNELVLGL DSDVHLGCCL IDMYSRSNKV VVGRRVFDRM
KCRNVFSWTA MINGYVENGD SDEALSLFRD MQVIDGIEPN RVSLVSVLPA CSSFSGLLSG
RQIHGFAVRK ELNNEVSLCN ALIDMYSKCG SLDSARRVFE DDSLCKDAIS WSSMISGYGL
HGKGQEAILL YDKMLQAGIR PDMITTVGIL SACSRSGLVN EGLNIYSSVI NDYGIEPTLE
IFACIVDMLG RAGQLDPALD FIKAMPVEPG PSVWGALVSC SIIHGDLEMQ ELAYRFLIQL
EPENPSNYVS ISNLYASSRR WDAVAEVRRM MKDKRLRKVP GCSWISINNK THCFYVADKA
HPSATSIYNM LDDLLLTMND AICSPHLETS T
//
