ID F6HQU4_VITVI Unreviewed; 772 AA.
AC F6HQU4;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 70.
DE RecName: Full=Pentatricopeptide repeat-containing protein, chloroplastic {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_08s0040g03370 {ECO:0000313|EMBL:CCB56992.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB56992.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; FN596008; CCB56992.1; -; Genomic_DNA.
DR RefSeq; XP_002272943.1; XM_002272907.4.
DR AlphaFoldDB; F6HQU4; -.
DR STRING; 29760.F6HQU4; -.
DR PaxDb; 29760-VIT_08s0040g03370-t01; -.
DR EnsemblPlants; Vitvi08g01166_t001; Vitvi08g01166_P001; Vitvi08g01166.
DR GeneID; 100256760; -.
DR Gramene; Vitvi08g01166_t001; Vitvi08g01166_P001; Vitvi08g01166.
DR KEGG; vvi:100256760; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR InParanoid; F6HQU4; -.
DR OrthoDB; 455855at2759; -.
DR Proteomes; UP000009183; Chromosome 8.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 8.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 12.
DR PANTHER; PTHR45613:SF476; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 7.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 15.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 175..209
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 210..244
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 245..279
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 280..314
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 315..349
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 350..384
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 385..419
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 420..454
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 455..489
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 490..524
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 525..559
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 560..594
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 595..629
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 630..664
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 665..700
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 772 AA; 86867 MW; A5C39519B313B8E9 CRC64;
MAFSSCLKWY PWTPPHTLTQ PPPTLSSAHN CKPFSKLISF TSTHHHDQQA VSPSFSTLSP
SPTTQLPQNF TPKQLRDALR RQSDEDSILD LLDWASKQPN FVPSSVIYEE VLRKLGKDGS
FGSMRRVLQE MKHTGCEIRR GTFLILIESY AKFELFDEAV AVVDIMEEEF GLKLDAFTYN
FLLNVLVDGN KLKLVEIVNS RMVSRGIKPD VTTFNILIKA LCRAHQIRPA ILMMEEMGSY
GLSPDEKTFT TLMQGFIEEG NMNGALRIRE QMVAAGCPSS NVTVNVLVHG YCKEGRIEEV
LSFIDEMSNE GFRPDRFTFN SLVNGLCRIG HVKHALEILD VMLQEGFDPD IFTYNSLIFG
LCKLGEVEEA VEILNQMILR DFSPNTVTYN TLISTLCKEN QVEEATELAR VLTSKGILPD
VCTFNSLIQG LCLTNNHRLA MELFEEMKTK GCHPDEFTYN MLIDSLCSRG RLEEALSLLK
EMESSGCSRN VVTYNTLIDG FCKNKRIEEA EEIFDEMELQ GISRNVVTYN TLIDGLCKNR
RVEEAAQLMD QMLMEGLKPD KFTYNSLLTY FCRAGDIKKA ADIVQTMTSN GCEPDSVTYG
TLILGLSKAG RVELASRLLR TVQLKGMVLA PQTYNPVIKA LFREKRTSEA VRLFREMMEK
GDPPDAVTYK VVFRGLCSGG GPIGEAVDFL VEMTDKGFLP DFSSFLMLAE GLCALSMEDT
LIKLVNRVMK QANFSDSEVS MIMGFLKIRK FQDALATLGR ILSSREPKKA FW
//
