ID F6HWJ2_VITVI Unreviewed; 876 AA.
AC F6HWJ2;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_07s0151g00320 {ECO:0000313|EMBL:CCB59056.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB59056.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; FN596271; CCB59056.1; -; Genomic_DNA.
DR AlphaFoldDB; F6HWJ2; -.
DR STRING; 29760.F6HWJ2; -.
DR PaxDb; 29760-VIT_07s0151g00320-t01; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_2_1; -.
DR InParanoid; F6HWJ2; -.
DR Proteomes; UP000009183; Chromosome 7, unordered.
DR ExpressionAtlas; F6HWJ2; baseline.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 9.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 14.
DR PANTHER; PTHR45613:SF476; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 5.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 14.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 205..240
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 241..275
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 276..310
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 311..345
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 346..380
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 381..415
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 416..450
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 451..485
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 486..520
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 521..555
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 556..590
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 591..625
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 626..660
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 732..766
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 876 AA; 97764 MW; 6D20EE88FE24A601 CRC64;
MFSSLSLQSS SNQTTEGTAF HISNLINKPN WEHDKTLKSL ASHMTPHLAG KIIGLQSNNV
ELGVRFFKWV CRQSSYCYDL DGRIQLLGVL VSRDLFGVAQ KAVVLLIQEC EDSENGVVKL
MGALDGMTEL GFRLSYPCYS TLLMCLAKLN MGFVAFLVYR RMVNEGFVLG GIDYRTVVNA
LCKNGFVQAA EMFCCKVLRL GFGLDTHVCT SLVLANCRRD DLGEAFRVFE KMSKEENCRP
NSVTYSILIH GLCEAGRLEE AFQLKQEMVE KGCQPSTRTY TVLIKAKCDI GMTDKAMKML
DEMATKACVP NVHTYTILID RLCREGKIEE ANGVFRKMLK HGLCPGIITF NALINGYCKE
GWVVSAFQLL SVMEKGNCKP NIRTYNELME GLCRVSKSYK AFLLLRRVVD NGLLPDRVTY
NILVDGFCKE GQLNMAFNIF NSMNSAGLEP DGFTFTALID GLCKLGRLEQ ANGILGSMVK
KGISLDEVTF TALIDGHCKI GKAKDVCFLF ENMVENRCLT TAHTFNCFLD ALGKDYKLNE
ANAMLGKMMK YGLVPSVVTH TILIEGHCRA GETALSLKML ERMKQAGCSP NVYTYTIIIN
GLCNNGRVEE AETILFSMSS FGVSPNHFTY AVLVKAHVKA GRLDRAFQIV STMVKNGCQP
NSHIYSALLS GFVLSNTAIG ARALSSTGDL DARSLSSEEN DNNCLSSHVF RLMDVDHALK
IRDEIKKCGV PTEDLYNFLV VGLCKEGRII EADQLTQDMV KHGLFPDKAI SSIIEHYCKT
CKYDNCLEFM KLVLDNKFVP SFASYCWVIH GLRNEGRVQE AQKLVSDLVR HTGIEEEVEV
TPSIEFLMKE EEDDPDKCLK LIKAIEQVHY KERPII
//
