GenomeNet

Database: UniProt
Entry: F6W7D7_CALJA
LinkDB: F6W7D7_CALJA
Original site: F6W7D7_CALJA 
ID   F6W7D7_CALJA            Unreviewed;       615 AA.
AC   F6W7D7; U3EL40;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   25-MAY-2022, sequence version 3.
DT   27-MAR-2024, entry version 66.
DE   SubName: Full=SRY-box transcription factor 13 {ECO:0000313|Ensembl:ENSCJAP00000030950.4};
GN   Name=SOX13 {ECO:0000313|Ensembl:ENSCJAP00000030950.4};
OS   Callithrix jacchus (White-tufted-ear marmoset).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC   Callitrichinae; Callithrix; Callithrix.
OX   NCBI_TaxID=9483 {ECO:0000313|Ensembl:ENSCJAP00000030950.4, ECO:0000313|Proteomes:UP000008225};
RN   [1] {ECO:0000313|Ensembl:ENSCJAP00000030950.4}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.;
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSCJAP00000030950.4}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; F6W7D7; -.
DR   STRING; 9483.ENSCJAP00000030950; -.
DR   Ensembl; ENSCJAT00000032706.4; ENSCJAP00000030950.4; ENSCJAG00000016794.4.
DR   eggNOG; KOG0528; Eukaryota.
DR   GeneTree; ENSGT00940000158759; -.
DR   InParanoid; F6W7D7; -.
DR   OMA; MEETPGH; -.
DR   TreeFam; TF320471; -.
DR   Proteomes; UP000008225; Chromosome 19.
DR   Bgee; ENSCJAG00000016794; Expressed in kidney and 6 other cell types or tissues.
DR   GO; GO:0005737; C:cytoplasm; IEA:Ensembl.
DR   GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR   GO; GO:0001227; F:DNA-binding transcription repressor activity, RNA polymerase II-specific; IEA:Ensembl.
DR   GO; GO:0042802; F:identical protein binding; IEA:Ensembl.
DR   GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IEA:Ensembl.
DR   GO; GO:0042492; P:gamma-delta T cell differentiation; IEA:Ensembl.
DR   GO; GO:0090090; P:negative regulation of canonical Wnt signaling pathway; IEA:Ensembl.
DR   GO; GO:0090336; P:positive regulation of brown fat cell differentiation; IEA:Ensembl.
DR   GO; GO:0045588; P:positive regulation of gamma-delta T cell differentiation; IEA:Ensembl.
DR   GO; GO:0021529; P:spinal cord oligodendrocyte cell differentiation; IEA:Ensembl.
DR   CDD; cd22030; HMG-box_SoxD; 1.
DR   Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR   InterPro; IPR009071; HMG_box_dom.
DR   InterPro; IPR036910; HMG_box_dom_sf.
DR   PANTHER; PTHR45789; FI18025P1; 1.
DR   PANTHER; PTHR45789:SF4; TRANSCRIPTION FACTOR SOX-13; 1.
DR   Pfam; PF00505; HMG_box; 1.
DR   SMART; SM00398; HMG; 1.
DR   SUPFAM; SSF47095; HMG-box; 1.
DR   PROSITE; PS50118; HMG_BOX_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008225}.
SQ   SEQUENCE   615 AA;  68438 MW;  E6F3EED7EC5F1C76 CRC64;
     MSMRSPISAQ LALDGVGTMV NCTIKSEEKK EPCHEAPLGS ATAAEPQPGD PAQESQDGAD
     SRAPAQDCSS PEGKGSPEPE RPGASEAASG SQEKLDFNRN LKEVVPAIEK LLSSDWKERF
     LGRNSMEAKD VKGTQESLAE KELQLLVMIH QLSTLRDQLL TAHSEQKNMA AMLFEKQQQQ
     MELARQQQEQ IAKQQQQLIQ QQHKINLLQQ QIQQVNMPYV MIPAFPPSHQ PLPVTPDSQL
     ALPIQPIPCK PVEYPLQLLH SPPAPVVKRP GAMAAHHPLQ EPSQPLNLTA KPKAPELPNT
     SSSPSLKMSN CAPRPPSHGG PTRDLQSSPP SLPLGFLGEG DPVTKAIQDA RQLLHSHSGP
     LEGSPNTSFR KDLISLDSSP AKERLEDGCV HPLEEAMLSC DMDGSRHFPE SRNSSHIKRP
     MNAFMVWAKD ERRKILQAFP DMHNSSISKI LGSRWKSMTN QEKQPYYEEQ ARLSRQHLEK
     YPDYKYKPRP KRTCIVEGKR LRVGEYKALM RTRRQDARQS YVIPPQAGQV QMSSSDVLYP
     RAAGMPLAQP LVEHYVPRSL DPNMPVIVNT CSLREEGEGT DDRHSVADGE MYRYSEDEDS
     EGEEKSDGEL VVLTD
//
DBGET integrated database retrieval system