ID F8F5D5_PAEMK Unreviewed; 457 AA.
AC F8F5D5;
DT 21-SEP-2011, integrated into UniProtKB/TrEMBL.
DT 21-SEP-2011, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE SubName: Full=YcxD {ECO:0000313|EMBL:AEI40946.1};
GN Name=ycxD {ECO:0000313|EMBL:AEI40946.1};
GN OrderedLocusNames=KNP414_02385 {ECO:0000313|EMBL:AEI40946.1};
OS Paenibacillus mucilaginosus (strain KNP414).
OC Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX NCBI_TaxID=1036673 {ECO:0000313|EMBL:AEI40946.1, ECO:0000313|Proteomes:UP000006620};
RN [1] {ECO:0000313|Proteomes:UP000006620}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KNP414 {ECO:0000313|Proteomes:UP000006620};
RA Wang J., Hu S., Hu X., Zhang B., Dong D., Zhang S., Zhao K., Wu D.;
RT "Complete genome sequence of Paenibacillus mucilaginosus KNP414.";
RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AEI40946.1, ECO:0000313|Proteomes:UP000006620}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KNP414 {ECO:0000313|EMBL:AEI40946.1,
RC ECO:0000313|Proteomes:UP000006620};
RX PubMed=24158556;
RA Lu J.J., Wang J.F., Hu X.F.;
RT "Genome Sequence of Growth-Improving Paenibacillus mucilaginosus Strain
RT KNP414.";
RL Genome Announc. 1:e00881-13(2013).
CC -!- SIMILARITY: In the C-terminal section; belongs to the class-I
CC pyridoxal-phosphate-dependent aminotransferase family.
CC {ECO:0000256|ARBA:ARBA00005384}.
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DR EMBL; CP002869; AEI40946.1; -; Genomic_DNA.
DR RefSeq; WP_013916107.1; NC_015690.1.
DR AlphaFoldDB; F8F5D5; -.
DR KEGG; pms:KNP414_02385; -.
DR PATRIC; fig|1036673.3.peg.2150; -.
DR HOGENOM; CLU_017584_0_0_9; -.
DR Proteomes; UP000006620; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0009058; P:biosynthetic process; IEA:InterPro.
DR CDD; cd00609; AAT_like; 1.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR004839; Aminotransferase_I/II.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR46577; HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR; 1.
DR PANTHER; PTHR46577:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR; 1.
DR Pfam; PF00155; Aminotran_1_2; 1.
DR Pfam; PF00392; GntR; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..69
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 457 AA; 51735 MW; E8806C3F589978D4 CRC64;
MLKYMELANE IEELIETLPL REGGKLPSIR TLAQRYECSK STIIRTLQEL ERQHRIYAVP
KSGYYVVRSR AASEDARTGV LDFIAAAPDP ELFPYLDFQH CINKAIETYK NDLFVYGTPQ
GLPSLLRVVR SLLASSQIFT ETDRLFVTSG VQQALSLLAA MPFPGGRRTV LIEQPGYHLM
VRYLQTYGVP ARGIRRTAEG IDMEELERLF RGGEIKFFYT MPRFHNPLGC SYTEDQKKQI
VRLAAKHDVY LVEDDYMADF EENRRADPLF AHDPSGRVIY LKSFAKILFP GLRLGIAVLP
RALAEVFSRH KKLQDIDTSM LSQAALEIYL KSGMFGRHKQ RLSRSYAKKA RLLQDSLQRA
AGQLGDRAAF RPAPTPMIHT HLELHPGIDV PRLAARLARR SVLIGPMDQH YLEGFPRDPL
LKLNVSQVKA DEIERGVELI AEEISGSPLH TAKGLST
//
