ID F9RJG7_9VIBR Unreviewed; 828 AA.
AC F9RJG7;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=ATP-dependent RNA helicase HrpB {ECO:0000313|EMBL:EGU41095.1};
GN ORFNames=VIS19158_04601 {ECO:0000313|EMBL:EGU41095.1};
OS Vibrio scophthalmi LMG 19158.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=870967 {ECO:0000313|EMBL:EGU41095.1, ECO:0000313|Proteomes:UP000004349};
RN [1] {ECO:0000313|EMBL:EGU41095.1, ECO:0000313|Proteomes:UP000004349}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMG 19158 {ECO:0000313|EMBL:EGU41095.1,
RC ECO:0000313|Proteomes:UP000004349};
RX PubMed=21930677; DOI=10.1099/ijs.0.032375-0;
RA Hoffmann M., Monday S.R., Allard M.W., Strain E.A., Whittaker P., Naum M.,
RA McCarthy P.J., Lopez J.V., Fischer M., Brown E.W.;
RT "Vibrio caribbeanicus sp. nov., isolated from the marine sponge
RT Scleritoderma cyanea.";
RL Int. J. Syst. Evol. Microbiol. 62:1736-1743(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGU41095.1}.
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DR EMBL; AFWE01000040; EGU41095.1; -; Genomic_DNA.
DR RefSeq; WP_005593206.1; NZ_AFWE01000040.1.
DR AlphaFoldDB; F9RJG7; -.
DR eggNOG; COG1643; Bacteria.
DR Proteomes; UP000004349; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd17990; DEXHc_HrpB; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR010225; HrpB.
DR InterPro; IPR049614; HrpB_DEXH.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR013689; RNA_helicase_ATP-dep_HrpB_C.
DR NCBIfam; TIGR01970; DEAH_box_HrpB; 1.
DR PANTHER; PTHR43519; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR PANTHER; PTHR43519:SF1; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF08482; HrpB_C; 1.
DR PIRSF; PIRSF005496; ATP_hel_hrpB; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:EGU41095.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 14..177
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 203..370
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 807..828
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 828 AA; 91772 MW; 723FC6402580D0DA CRC64;
MSQLPIEGVM PELLSGVRDC NQLILKAAPG AGKSTFFPLQ LLQQQAVSGK IIMLEPRRLA
ARNIARYLAQ QLGETVGQRV GYRVRGENKV SQATQLEIVT EGIMTRMIQS DPELNGVDLI
IFDEFHERSI HADMGLALCL EIQEALRDDL KLVVMSATLD QQALARLMPQ SRYVQSQGRS
YPVEFRYAPL KANERFVDVI ARNIHSLMNS ESGSLLAFLP GVSAIQQLQQ QLQPSSLLPS
DVDICPLYGQ LSVEQQQAAI HPAPTGRRKV VLATNIAETS LTIEGIRMVV DSGLERIAKY
DLKTGITKLE QVRIAQSSAE QRAGRAGRTE AGICLRLYSE GQLAQQPAVP AAEILHSDLS
SLAMELAQWG CLDAGELNWL DLPPNSAMAQ ARSLLSSLGL VDDKHQLTPM GQSAQKLGLE
PRIAAMLVQA TQLDHGRPNH WPTTALAVAA LLEEPERNVV DFAHSVLRFK ARKHTKQRIV
EARAQSLARK LGLSFSLAAV DEMQVALVLA LAFPDRVAQS RSKQGGRYLL ANGHGAQLRD
DEPLAASDYL IAIDLMRSHG DAAMIYSAID LDLHALQNAL PEKFIQQQIA DWDDKRGKLV
AEERTQWGDL IVDSREMAQP SADKMSEALL NYVRRQGLQC LNWTDSASDL LARLRCGCEW
LPEQAWPALS DDALLNDLEL WLSPYLVGVR SAKALSQVNL NEALLAYLGW PLNQEIEQWL
PIDYVLPTGS KKKIRYQVGH EPILSVRMQE VFGEQSSPTV AQGRKTVVLE LLSPAQRPLQ
LTSNLASFWS GAYQEVKKEM KGRYPKHVWP DDPANHVATT KTKRHFNQ
//