ID F9SVL2_VIBOR Unreviewed; 540 AA.
AC F9SVL2;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:EGU48314.1};
GN ORFNames=VIOR3934_14427 {ECO:0000313|EMBL:EGU48314.1};
OS Vibrio orientalis CIP 102891 = ATCC 33934.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio; Vibrio oreintalis group.
OX NCBI_TaxID=675816 {ECO:0000313|EMBL:EGU48314.1, ECO:0000313|Proteomes:UP000002817};
RN [1] {ECO:0000313|EMBL:EGU48314.1, ECO:0000313|Proteomes:UP000002817}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CIP 102891 / ATCC 33934 {ECO:0000313|Proteomes:UP000002817};
RX PubMed=21930677; DOI=10.1099/ijs.0.032375-0;
RA Hoffmann M., Monday S.R., Allard M.W., Strain E.A., Whittaker P., Naum M.,
RA McCarthy P.J., Lopez J.V., Fischer M., Brown E.W.;
RT "Vibrio caribbeanicus sp. nov., isolated from the marine sponge
RT Scleritoderma cyanea.";
RL Int. J. Syst. Evol. Microbiol. 62:1736-1743(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGU48314.1}.
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DR EMBL; AFWH01000040; EGU48314.1; -; Genomic_DNA.
DR AlphaFoldDB; F9SVL2; -.
DR STRING; 675816.VIA_001021; -.
DR PATRIC; fig|675816.5.peg.2964; -.
DR eggNOG; COG3284; Bacteria.
DR Proteomes; UP000002817; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF77; TRANSCRIPTIONAL REGULATORY PROTEIN GLRR; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 232..457
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 540 AA; 59743 MW; 8D133697DA06D697 CRC64;
MIEAVKDSAL PLFNQVLAHS DSRLILTDPD GVVLAAWGQD RFREKLLSIA LEPGSCWLEK
LKGTNAIGTA LYEKRAVSII GDQHFIKQHR FISCSASPLF NPEGQLVGVL DITSEQSRHD
VTTQVLVQNM VQLIENHLLT HTPDGAIQIN VAHDESILKS GWQGIVIANE HGEVLAHNQV
AAQLLPDVPL VGASIDMLFE RSSNGSQPLI FDKKGLGKRR LPKKSLTPSS QLHYGEEKIE
LAWQQANKVM GRDINLLILG ETGVGKGEFV KALHKQSDRA NHALITVNCG ALPKDLIESE
LFGHAPGAFT GASKNGYLGK IRQADKGVLF LDEIGEMPLE AQCRLLTVLQ DKVVMPVGET
NNYRVDIQVI SATHQNLQQL VEQGKFREDL YYRLNGLVVT LPPLRERQDK ESLIQAIFAK
YKQGYQSISP ALMEGLLSYH WKGNLRELDN LLKVTALIAN EQDELTAEHI PQHFAQPLMS
HAKTVDDRQE ADLNTTLNQT LITAYQSHKG NISKVSRVLG VSRNTVYRKL KALGLLPSNG
//
