ID F9WDG6_TRYCI Unreviewed; 972 AA.
AC F9WDG6;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE SubName: Full=WGS project CAEQ00000000 data, annotated contig 2360 {ECO:0000313|EMBL:CCD15319.1};
GN ORFNames=TCIL3000_0_58500 {ECO:0000313|EMBL:CCD15319.1};
OS Trypanosoma congolense (strain IL3000).
OC Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina;
OC Trypanosomatida; Trypanosomatidae; Trypanosoma; Nannomonas.
OX NCBI_TaxID=1068625 {ECO:0000313|EMBL:CCD15319.1, ECO:0000313|Proteomes:UP000000702};
RN [1] {ECO:0000313|Proteomes:UP000000702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IL3000 {ECO:0000313|Proteomes:UP000000702};
RA Jackson A.P., Berry A., Allison H.C., Burton P., Anderson J., Aslett M.,
RA Brown R., Corton N., Harris D., Hauser H., Gamble J., Gilderthorp R.,
RA McQuillan J., Quail M.A., Sanders M., Van Tonder A., Ginger M.L.,
RA Donelson J.E., Field M.C., Barry J.D., Berriman M., Hertz-Fowler C.;
RT "Divergent evolution of antigenic variation in African trypanosomes.";
RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CCD15319.1, ECO:0000313|Proteomes:UP000000702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IL3000 {ECO:0000313|EMBL:CCD15319.1,
RC ECO:0000313|Proteomes:UP000000702};
RX PubMed=22331916; DOI=10.1073/pnas.1117313109;
RA Jackson A.P., Berry A., Aslett M., Allison H.C., Burton P.,
RA Vavrova-Anderson J., Brown R., Browne H., Corton N., Hauser H., Gamble J.,
RA Gilderthorp R., Marcello L., McQuillan J., Otto T.D., Quail M.A.,
RA Sanders M.J., van Tonder A., Ginger M.L., Field M.C., Barry J.D.,
RA Hertz-Fowler C., Berriman M.;
RT "Antigenic diversity is generated by distinct evolutionary mechanisms in
RT African trypanosome species.";
RL Proc. Natl. Acad. Sci. U.S.A. 109:3416-3421(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCD15319.1}.
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DR EMBL; CAEQ01001864; CCD15319.1; -; Genomic_DNA.
DR AlphaFoldDB; F9WDG6; -.
DR VEuPathDB; TriTrypDB:TcIL3000_0_58500; -.
DR OMA; WESVVTG; -.
DR OrthoDB; 5477616at2759; -.
DR Proteomes; UP000000702; Unassembled WGS sequence.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0032040; C:small-subunit processome; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR002372; PQQ_repeat.
DR InterPro; IPR007319; SSU_processome_Utp21.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22840; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR PANTHER; PTHR22840:SF12; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR Pfam; PF13360; PQQ_2; 1.
DR Pfam; PF04192; Utp21; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 9.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000000702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 220..255
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 481..514
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 572..614
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 764..965
FT /note="Small-subunit processome Utp21"
FT /evidence="ECO:0000259|Pfam:PF04192"
FT COILED 730..757
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 972 AA; 106683 MW; 88DB9C1A6E275DBE CRC64;
MESFSPFRVV GSVCGELPLS STVLYGAPVL MVATGHTFQL FRGKELSMLR GGPHFEKTVR
AVAQAGKYRF VAEGPRIHAF VHHKPLWTLL HSEITKCKVN HLLAVDDILF CVGQDKRIVV
REVKSGRALG DFLVENSEDV RAIAVPTGYN NKLLLGSAEG SLQLYNFRSG ECLWHSRRSG
GAQITSLAVS NYKDIVAYGT SHGHTVVLNL ATGEEIMSFD QEEKGAVTAL AFRADKEALV
TGSSTGEVAI WDLENRCLDG LLTRSKQVKS EAEVLDNPHT NAVHSIVVLP TETTTIVTAG
ADNALLQFRF DTVDGLGLLV RERRGHMGGC TEAQFYNNDL LITAGLDRSL RVTHVFSDRA
SWELSQGQLG RRGREKQMGR EALKMPPAIA LSSCTSRNYQ WSSVVSLHEA SAKMCGWRMD
TRVLDCKISG IKTSMHTARS VAMSGCGNYA IVGYSSGNVA VISIQNKGIR QLFDASLRPD
DCAHVGSVEC VEVACGNSII VTAGLDSNIK LWSLVNCRLR TVIKADCPVH KSCIHQLSSL
LITAQHFLIR VYHCNPDVGF TAKELRSPVR TFEGHASPIT AVALAPDSYR YVVSASSDAA
LFVWDLASSA CVGQYRMPSP AISLNFHPDA LFMVSTHVGE RGAFLWSNNL RYGFVPEVVT
DPKARTVDRL PLLHFPTSHG AMEDEEEDGT AVEKKFQNGD QRLNKEFDGS DDEAVGELTD
TTDMTAREGV QLFDAKKDAA LAQIEREERE LAKLNDIISG GLRLSGVPRS IWFNLTLLEQ
IKEKNQPLLP PKKRDIPFFL PSTQELRPTF LVAAPAVKDK NCSTPASRIV GAALTDLTTF
QKMLVDKDYD ATVSYILSLS TAQAVDLEIK RSIDYSEGCT YTKEELEKMK SCLRGLLSFV
VECLKRRDNV DLVQGILASV IRSHGTLITR CGAELLDVIE ELTTLQNSIR YAVDHLVSYP
SCLAGTFSGT HF
//
