ID F9YTU5_CAPCC Unreviewed; 710 AA.
AC F9YTU5;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126};
GN OrderedLocusNames=Ccan_07610 {ECO:0000313|EMBL:AEK22879.1};
OS Capnocytophaga canimorsus (strain 5).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Capnocytophaga.
OX NCBI_TaxID=860228 {ECO:0000313|EMBL:AEK22879.1, ECO:0000313|Proteomes:UP000008895};
RN [1] {ECO:0000313|EMBL:AEK22879.1, ECO:0000313|Proteomes:UP000008895}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=5 {ECO:0000313|Proteomes:UP000008895};
RX PubMed=21914877; DOI=10.1128/JB.05853-11;
RA Manfredi P., Pagni M., Cornelis G.R.;
RT "Complete genome sequence of the dog commensal and human pathogen
RT Capnocytophaga canimorsus strain 5.";
RL J. Bacteriol. 193:5558-5559(2011).
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DR EMBL; CP002113; AEK22879.1; -; Genomic_DNA.
DR RefSeq; WP_013996869.1; NC_015846.1.
DR AlphaFoldDB; F9YTU5; -.
DR STRING; 860228.Ccan_07610; -.
DR KEGG; ccm:Ccan_07610; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_10; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000008895; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR003583; Hlx-hairpin-Hlx_DNA-bd_motif.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00278; HhH1; 2.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Reference proteome {ECO:0000313|Proteomes:UP000008895}.
FT DOMAIN 638..707
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 710 AA; 80024 MW; 92FC32F1C333A83C CRC64;
MNNIQYIQNQ YHSLREKQIE HTLSLLSQGC TIPFIARYRK DKTENLDEIA IGQIAKAQTD
YENILKRKTT IFTAIEEQGK LTDTLKSKIE NTFILSELED LYLPFKKRKK TRGDVAKEKG
LEPLAKTIMA QRTKDVQGEA TKFISNQVLS EKQALEGASD IIAEWINENL FIRKTLRRMF
QRNANIISQV IKNKSEDNEA QKFMMYFDWE EHLMKAPSHR ILAMLRAESE GFVRLKIEIN
TDEALDFIEK NIIKSSGEVA DFLSDTIADS YKRLLSPSIA NEVLQEAKEQ ADSKAIAIFA
ENLKQLLLAS PLGEKRILAI DPGFKTGCKV VCLDPKGDLL HNETLYPHPP QKDLTMAMKK
LKSMVNAYQI EAIAIGNGTA SRETEWFVKK IAFDRPLQVF VVNEAGASVY SASKIAREEF
PTYDVTVRGA VSIGRRLADP LAELVKIDPK AIGVGQYQHD VNPTKLKEEL DAVVAHCVNS
VGINLNTAGK ELLAYVSGIG EKMAENIVKY RSENGAFTQR KELLNVPRLG EKAYQQAVAF
LRIHNGKNRL DNSAVHPEAY PIIEQMASDL KISSEALIGN TSAIAQIDIQ RYINDDVGTM
YLKDLLKELE KPGIDPRKSV KIFEFDPNVK TFDDIRQGML LAGIVNNITA FGCFVDIGIK
ESGLIHISQL KEGYVANVNE VVKLHQHVMV KVIEKDEQRR RIALKLEDFV
//
