ID G0RL23_HYPJQ Unreviewed; 632 AA.
AC G0RL23;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EGR47935.1};
GN ORFNames=TRIREDRAFT_62821 {ECO:0000313|EMBL:EGR47935.1};
OS Hypocrea jecorina (strain QM6a) (Trichoderma reesei).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma.
OX NCBI_TaxID=431241 {ECO:0000313|Proteomes:UP000008984};
RN [1] {ECO:0000313|EMBL:EGR47935.1, ECO:0000313|Proteomes:UP000008984}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=QM6a {ECO:0000313|EMBL:EGR47935.1,
RC ECO:0000313|Proteomes:UP000008984};
RX PubMed=18454138; DOI=10.1038/nbt1403;
RA Martinez D., Berka R.M., Henrissat B., Saloheimo M., Arvas M., Baker S.E.,
RA Chapman J., Chertkov O., Coutinho P.M., Cullen D., Danchin E.G.,
RA Grigoriev I.V., Harris P., Jackson M., Kubicek C.P., Han C.S., Ho I.,
RA Larrondo L.F., de Leon A.L., Magnuson J.K., Merino S., Misra M., Nelson B.,
RA Putnam N., Robbertse B., Salamov A.A., Schmoll M., Terry A., Thayer N.,
RA Westerholm-Parvinen A., Schoch C.L., Yao J., Barabote R., Nelson M.A.,
RA Detter C., Bruce D., Kuske C.R., Xie G., Richardson P., Rokhsar D.S.,
RA Lucas S.M., Rubin E.M., Dunn-Coleman N., Ward M., Brettin T.S.;
RT "Genome sequencing and analysis of the biomass-degrading fungus Trichoderma
RT reesei (syn. Hypocrea jecorina).";
RL Nat. Biotechnol. 26:553-560(2008).
CC -!- SIMILARITY: Belongs to the RENT3 family.
CC {ECO:0000256|ARBA:ARBA00005991}.
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DR EMBL; GL985066; EGR47935.1; -; Genomic_DNA.
DR RefSeq; XP_006966006.1; XM_006965944.1.
DR AlphaFoldDB; G0RL23; -.
DR STRING; 431241.G0RL23; -.
DR EnsemblFungi; EGR47935; EGR47935; TRIREDRAFT_62821.
DR GeneID; 18486975; -.
DR KEGG; tre:TRIREDRAFT_62821; -.
DR VEuPathDB; FungiDB:TRIREDRAFT_62821; -.
DR eggNOG; KOG1295; Eukaryota.
DR HOGENOM; CLU_018549_0_0_1; -.
DR OrthoDB; 77197at2759; -.
DR Proteomes; UP000008984; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:InterPro.
DR CDD; cd12455; RRM_like_Smg4_UPF3; 1.
DR CDD; cd00590; RRM_SF; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR039722; Upf3.
DR InterPro; IPR005120; UPF3_dom.
DR PANTHER; PTHR13112:SF0; FI21285P1; 1.
DR PANTHER; PTHR13112; UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF03467; Smg4_UPF3; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008984};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 491..557
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 179..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 220..503
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 562..632
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..50
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 220..271
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 287..309
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 363..405
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 445..503
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 575..606
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 615..632
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 632 AA; 64847 MW; 6449510EF49DE666 CRC64;
MSTQTPQVLS RRTNASAAES TKKHGEARST AHDADTPKAT KTRAPQEGEK VIIRRLPPGL
TEAECLSILG PEWAVGNGKV DWFSYAVGKV SNELSKPSRP ARAYIHLMRK EYIMPLSDFV
RNATWEDAKS TFTSPSLIGP PVLEIAIYKK VPGNKKRVDA RQGTIDQDPE FMAFLEGLAN
PAPPRESNEN DDVEEPAETK VTTTPLIEYL KEKKANKAKE AAAAKSAKHA RQQEASASKG
KSASKDDEGS KKKGKEAKNP KSDKAAPKEP VKILTKKAAA AEQSADASKP AANQASNAST
SSAAANAAEA PTSKSRRAGV SIAARILQRD LGLSPGSAYR RARQDAAKAE AGSKPTAAGK
ESKEQPSAAS ENTAPSAQAS AESSTSAPAP AKDNASKSQQ SARKTRGGKN ADKAKASESP
STSTPVILKK KGGAGPDAEA AKSAAETATA SQQKDSSKSA TSAANGPKGS SAKSSGSQKK
SGAASSSANG TRGFVKHANS SQGITEPVLK QALEAFGTVT FIEVDKRKGF AYVDFSDHAG
LAKAISASPI SVAQGTVQVL ERKDKKPAAA AAAAASSGSG NTAATPNTAK DSAASEKSSN
PTSSGRGRRG RGGKGAASSS TNGTAVAATS GG
//
