ID G1D759_RICCO Unreviewed; 169 AA.
AC G1D759;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE RecName: Full=Photosystem I assembly protein Ycf3 {ECO:0000256|HAMAP-Rule:MF_00439};
GN Name=ycf3 {ECO:0000256|HAMAP-Rule:MF_00439,
GN ECO:0000313|EMBL:AEJ82556.1};
GN ORFNames=RCOM_ORF00038 {ECO:0000313|EMBL:AEJ82556.1};
OS Ricinus communis (Castor bean).
OG Plastid; Chloroplast {ECO:0000313|EMBL:AEJ82556.1}.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|EMBL:AEJ82556.1, ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|EMBL:AEJ82556.1, ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=21750729; DOI=10.1371/journal.pone.0021743;
RA Rivarola M., Foster J.T., Chan A.P., Williams A.L., Rice D.W., Liu X.,
RA Melake-Berhan A., Huot Creasy H., Puiu D., Rosovitz M.J., Khouri H.M.,
RA Beckstrom-Sternberg S.M., Allan G.J., Keim P., Ravel J., Rabinowicz P.D.;
RT "Castor bean organelle genome sequencing and worldwide genetic diversity
RT analysis.";
RL PLoS ONE 6:E21743-E21743(2011).
RN [2] {ECO:0000313|EMBL:QWQ50285.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=E571 {ECO:0000313|EMBL:QWQ50285.1};
RA Muraguri S., Xu W., Chapman M., Muchugi A., Oluwaniyi A., Oyebanji O.,
RA Liu A.;
RT "Intraspecific variation within Castor bean (Ricinus communis L.) based on
RT chloroplast genomes.";
RL Ind. Crops Prod. 155:0-112779(2020).
RN [3] {ECO:0000313|EMBL:QWQ50370.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=8BW001 {ECO:0000313|EMBL:QWQ50370.1}, E25
RC {ECO:0000313|EMBL:QWQ50455.1}, E4103 {ECO:0000313|EMBL:QWQ50540.1},
RC E5112 {ECO:0000313|EMBL:QWQ50625.1}, India_C
RC {ECO:0000313|EMBL:QWQ50710.1}, and K32 {ECO:0000313|EMBL:QWQ50795.1};
RA Muraguri S., Xu W., Chapman M., Muchugi A., Oluwaniyi A., Oyebanji O.,
RA Liu A.;
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:QWQ50880.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=K314 {ECO:0000313|EMBL:QWQ50965.1}, K411
RC {ECO:0000313|EMBL:QWQ51050.1}, K67 {ECO:0000313|EMBL:QWQ50880.1}, TB5
RC {ECO:0000313|EMBL:QWQ51135.1}, and ZB306
RC {ECO:0000313|EMBL:QWQ51220.1};
RA Muraguri S., Xu W., Chapman M., Muchugi A., Adejobi O., Oyebanji O.,
RA Liu A.;
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Seems to be required for the assembly of the photosystem I
CC complex. {ECO:0000256|HAMAP-Rule:MF_00439}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004170};
CC Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004170}. Plastid,
CC chloroplast thylakoid membrane {ECO:0000256|HAMAP-Rule:MF_00439};
CC Peripheral membrane protein {ECO:0000256|HAMAP-Rule:MF_00439}.
CC -!- SIMILARITY: Belongs to the Ycf3 family. {ECO:0000256|HAMAP-
CC Rule:MF_00439}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|HAMAP-Rule:MF_00439}.
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DR EMBL; JF937588; AEJ82556.1; -; Genomic_DNA.
DR EMBL; MT555090; QWQ50285.1; -; Genomic_DNA.
DR EMBL; MT555091; QWQ50370.1; -; Genomic_DNA.
DR EMBL; MT555092; QWQ50455.1; -; Genomic_DNA.
DR EMBL; MT555093; QWQ50540.1; -; Genomic_DNA.
DR EMBL; MT555094; QWQ50625.1; -; Genomic_DNA.
DR EMBL; MT555095; QWQ50710.1; -; Genomic_DNA.
DR EMBL; MT555096; QWQ50795.1; -; Genomic_DNA.
DR EMBL; MT555097; QWQ50880.1; -; Genomic_DNA.
DR EMBL; MT555098; QWQ50965.1; -; Genomic_DNA.
DR EMBL; MT555099; QWQ51050.1; -; Genomic_DNA.
DR EMBL; MT555100; QWQ51135.1; -; Genomic_DNA.
DR EMBL; MT555101; QWQ51220.1; -; Genomic_DNA.
DR RefSeq; YP_005090179.1; NC_016736.1.
DR AlphaFoldDB; G1D759; -.
DR STRING; 3988.G1D759; -.
DR GeneID; 11542312; -.
DR KEGG; rcu:11542312; -.
DR InParanoid; G1D759; -.
DR Proteomes; UP000008311; Chloroplast.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0048564; P:photosystem I assembly; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR HAMAP; MF_00439; Ycf3; 1.
DR InterPro; IPR022818; PSI_Ycf3_assembly.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001440; TPR_1.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR26312:SF230; PHOTOSYSTEM I ASSEMBLY PROTEIN YCF3; 1.
DR PANTHER; PTHR26312; TETRATRICOPEPTIDE REPEAT PROTEIN 5; 1.
DR Pfam; PF00515; TPR_1; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 3: Inferred from homology;
KW Chloroplast {ECO:0000256|ARBA:ARBA00022528, ECO:0000313|EMBL:AEJ82556.1};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_00439};
KW Photosynthesis {ECO:0000256|ARBA:ARBA00022531, ECO:0000256|HAMAP-
KW Rule:MF_00439}; Plastid {ECO:0000313|EMBL:AEJ82556.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW Repeat {ECO:0000256|HAMAP-Rule:MF_00439};
KW Thylakoid {ECO:0000256|ARBA:ARBA00023078, ECO:0000256|HAMAP-Rule:MF_00439};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|HAMAP-
KW Rule:MF_00439}.
FT REPEAT 73..106
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 73..106
FT /note="TPR 2"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00439"
FT REPEAT 121..154
FT /note="TPR 3"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00439"
SQ SEQUENCE 169 AA; 19638 MW; 6CBAF94DA6D50D9D CRC64;
MPRSRITGNF IDKTFSIVAN ILLRIIPTTS GEKEAFTYYR DGVMSAQSEG NYAEALQNYY
EAMRLEIDPY DRSYILYNIG LIHTSNGEHT KALEYYFRAL ERNPFLPQAL NNMAVICHYR
GEQAIRQGDS EIAEAWFDQA AEYWKQAIAL TPGNYIEAQN WLKITRRFE
//
