ID G1NY91_MYOLU Unreviewed; 568 AA.
AC G1NY91;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=Collagen type XIII alpha 1 chain {ECO:0000313|Ensembl:ENSMLUP00000002369.2};
GN Name=COL13A1 {ECO:0000313|Ensembl:ENSMLUP00000002369.2};
OS Myotis lucifugus (Little brown bat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae;
OC Myotis.
OX NCBI_TaxID=59463 {ECO:0000313|Ensembl:ENSMLUP00000002369.2, ECO:0000313|Proteomes:UP000001074};
RN [1] {ECO:0000313|Ensembl:ENSMLUP00000002369.2, ECO:0000313|Proteomes:UP000001074}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21993624; DOI=10.1038/nature10530;
RA Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S.,
RA Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B.,
RA Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.,
RA Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M.,
RA Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M.,
RA Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D.,
RA Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J.,
RA Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S.,
RA Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A.,
RA Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R.,
RA Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R.,
RA Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C.,
RA Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E.,
RA Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N.,
RA Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.;
RT "A high-resolution map of human evolutionary constraint using 29 mammals.";
RL Nature 478:476-482(2011).
RN [2] {ECO:0000313|Ensembl:ENSMLUP00000002369.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; AAPE02039728; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAPE02039729; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAPE02039730; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAPE02039731; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAPE02039732; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAPE02039733; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAPE02039734; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAPE02039735; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAPE02039736; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; G1NY91; -.
DR STRING; 59463.ENSMLUP00000002369; -.
DR Ensembl; ENSMLUT00000002606.2; ENSMLUP00000002369.2; ENSMLUG00000002593.2.
DR eggNOG; KOG3544; Eukaryota.
DR GeneTree; ENSGT00940000154865; -.
DR HOGENOM; CLU_020867_0_0_1; -.
DR InParanoid; G1NY91; -.
DR OMA; WTSRCSR; -.
DR Proteomes; UP000001074; Unassembled WGS sequence.
DR GO; GO:0005911; C:cell-cell junction; IEA:Ensembl.
DR GO; GO:0001958; P:endochondral ossification; IEA:Ensembl.
DR GO; GO:0001763; P:morphogenesis of a branching structure; IEA:Ensembl.
DR InterPro; IPR008160; Collagen.
DR PANTHER; PTHR24023; COLLAGEN ALPHA; 1.
DR PANTHER; PTHR24023:SF1082; COLLAGEN ALPHA-1(X) CHAIN; 1.
DR Pfam; PF01391; Collagen; 4.
PE 4: Predicted;
KW Hydroxylation {ECO:0000256|ARBA:ARBA00023278};
KW Reference proteome {ECO:0000313|Proteomes:UP000001074}.
FT REGION 1..43
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 81..256
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 288..568
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 137..173
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 336..350
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 426..446
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 522..539
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 568 AA; 54839 MW; F282E8F2D3032DF1 CRC64;
LLVQKWKLHS RRRREAPKTS PGCHCPPGKE PGPVGRPGLP GDKGAIGMPG RVGVKGQPGE
KVSPHFPLCP ILTPLHSFQG QPGTRGFPGF PGPIGLDGKP GYPGPKGEMG PQGEKGEKGQ
CGEYPHRGEQ GQAGIQGPPG PPGPPGPSGP LGQPGLPGPM GPPGFPGPPG PKGDPGIQGY
HGRKGERGMP GMPGKHGVKV PAPHTPGQPG EKGAAGLGLL GQKGEKGDSG NSIGGGRAEP
GPPGLPGPPG PKGPAAEIVF ALQGSKGEPG KGEAVECNAS INEALQVRGA GLGGPPGLPG
QIGPPGAPGI PGQKGEIGLP GPPGHDGEKG PRGKPGDMGP PGPQGPPGKP GPAGIRGEDG
HPGSPGEKGE KGETGQAGPP GLDGPTGEKG EPGGPGRPGT TGLPGPIGLP GFTGEKGEPG
EKGDPGVEVP GPPGPEGPPG PPGLQGIPGP KGEAGLDGAK GEPGVQGEKG DRGPLGLPGT
PGPIGVPGPA GPKGERGSKG DPGMTGPTGA AGLPGLHGPP GDKGNRGERG KKGSRGPKGD
KGDQGAPGLD APCPLGEDGL PVQGCWNK
//
