ID G2GYL3_9ENTR Unreviewed; 891 AA.
AC G2GYL3;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
GN ORFNames=Rin_00008740 {ECO:0000313|EMBL:EGY29168.1};
OS Candidatus Regiella insecticola 5.15.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; aphid secondary symbionts; Regiella.
OX NCBI_TaxID=1005043 {ECO:0000313|EMBL:EGY29168.1, ECO:0000313|Proteomes:UP000004116};
RN [1] {ECO:0000313|EMBL:EGY29168.1, ECO:0000313|Proteomes:UP000004116}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=R5.15 {ECO:0000313|Proteomes:UP000004116};
RX PubMed=21948522; DOI=10.1101/gr.125351.111;
RA Hansen A.K., Vorburger C., Moran N.A.;
RT "Genomic basis of endosymbiont-conferred protection against an insect
RT parasitoid.";
RL Genome Res. 22:106-114(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGY29168.1}.
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DR EMBL; AGCA01000221; EGY29168.1; -; Genomic_DNA.
DR AlphaFoldDB; G2GYL3; -.
DR PATRIC; fig|1005043.3.peg.776; -.
DR Proteomes; UP000004116; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd02655; RNAP_beta'_C; 1.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.150.390; -; 1.
DR Gene3D; 1.10.1790.20; -; 1.
DR Gene3D; 2.40.50.100; -; 3.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF54; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:EGY29168.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000004116};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 13..130
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04983"
FT DOMAIN 161..250
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF05000"
FT DOMAIN 252..800
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04998"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EGY29168.1"
SQ SEQUENCE 891 AA; 96844 MW; 358C9588CCDBBDEA CRC64;
RDCVNAKGEG MVLTGPKEAE RVYRMGLASL HARVKIRISE EVCNIEGEKT SQTSIVDTTI
GRAILWMIVP KGLPYSIVNQ TLGKKAISKM LNTCYRILGL KPTVIFADQI MYTGFTYAAR
SGMSVGIDDM VIPKEKIEII TEAVTEVSEI QEQFKSGLVT VGERYNKVID IWAAANERVA
KAMMKNLSVE NVTDCNGKEE QQVSFNSIFM MADSGARGSP AQIRQLAGMR GLMAKPDGSI
IETPITANFR EGLNVLQYFI STHGARKGLA DTALKTANSG YLTRRLVDVA QDLVVTEDDC
GTNDGLVMTP VIEGGNVKEA LRERVLGRVT AEDIIKPGSA DILVPRNSLL SEKCCDLLEE
NSVDTVKVRS VVNCETDFGI CANCYGRDLA RGHIINKGEA VGVIAAQSIG EPGTQLTMRT
FHIGGAASRA AAESSITVNS KGKLRLSNAK FVINSAGKCV ITSRNTELKL IDEFGRTKES
YKIPYGAIIA KGDGAEVNTG ETVANWDPHI MPVITEVAGF IRFSDMIDSQ TITRQTDDLT
GLSSLVVLDS AERTGSGKDL RPALKIVDAK GNEVLIPGTD MPAQYFLPGK AIVQLKDEVE
IGVGDTLARI PQESSGTKDI TGGLPRVADL FEARRPKEPA ILAEHSGIIS FGKETKGKRR
LVISPLDGSD AYEEMIPKWR QLNVFEGEMV ERGDVLSDGP ESPHDILRLR GVHAVTRYIT
NEVQEVYRLQ GVKINDKHIE VIVRQMLRKG TIVNAGGADF LAGEQAEISR VKIANRKLVA
EDKTEATFTR DLLGITKASL ATESFISAAS FQETTRVLTE AAVAGKRDEL RGLKENVIVG
RLIPAGTGYA HHQKRMRSRL VEESVALKMS PDEASANMAE LLNAGFDNKN E
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