ID G3TJW3_LOXAF Unreviewed; 240 AA.
AC G3TJW3;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=High mobility group nucleosome binding domain 5 {ECO:0008006|Google:ProtNLM};
OS Loxodonta africana (African elephant).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.
OX NCBI_TaxID=9785 {ECO:0000313|Ensembl:ENSLAFP00000015055.2, ECO:0000313|Proteomes:UP000007646};
RN [1] {ECO:0000313|Ensembl:ENSLAFP00000015055.2, ECO:0000313|Proteomes:UP000007646}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000015055.2,
RC ECO:0000313|Proteomes:UP000007646};
RA Di Palma F., Heiman D., Young S., Johnson J., Lander E.S., Lindblad-Toh K.;
RT "The Genome Sequence of Loxodonta africana (African elephant).";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLAFP00000015055.2}
RP IDENTIFICATION.
RC STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000015055.2};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the HMGN family.
CC {ECO:0000256|ARBA:ARBA00007696}.
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DR AlphaFoldDB; G3TJW3; -.
DR STRING; 9785.ENSLAFP00000015055; -.
DR Ensembl; ENSLAFT00000017957.2; ENSLAFP00000015055.2; ENSLAFG00000017956.2.
DR eggNOG; ENOG502QQGX; Eukaryota.
DR GeneTree; ENSGT00730000111570; -.
DR HOGENOM; CLU_082746_0_0_1; -.
DR InParanoid; G3TJW3; -.
DR OMA; EYNNENA; -.
DR Proteomes; UP000007646; Unassembled WGS sequence.
DR GO; GO:0000785; C:chromatin; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0031492; F:nucleosomal DNA binding; IEA:InterPro.
DR GO; GO:0006325; P:chromatin organization; IEA:InterPro.
DR InterPro; IPR040164; HMGN5.
DR InterPro; IPR000079; HMGN_fam.
DR PANTHER; PTHR23145:SF6; HIGH MOBILITY GROUP NUCLEOSOME-BINDING DOMAIN-CONTAINING PROTEIN 5; 1.
DR PANTHER; PTHR23145; NUCLEOSOMAL BINDING PROTEIN 1; 1.
DR Pfam; PF01101; HMG14_17; 1.
DR PRINTS; PR00925; NONHISHMG17.
DR SMART; SM00527; HMG17; 1.
DR PROSITE; PS00355; HMG14_17; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000007646}.
FT REGION 1..240
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..15
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 32..46
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 61..240
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 240 AA; 27202 MW; B16FE28DB6EFB399 CRC64;
AAGEGDERQE PKRRSARLSA MPAPIPLELK PKRIVTPRKM KTKNDMMEKN VATSAKAVAE
TKQEEVVKEE YNSENEEAKI IEVSYNKEDG KEDKNGKEKE DGKEDKDAKE KEDGKEDKDA
KEKEDGKEDK DTKEKREDGK DEDTKGNEDG KEDEDGKGQG EDGKDKGEDE KEEEYRKKKG
DGRGKEDEDR KEDEDGKEEE VKEEENSKEE GGKREGKDGG NEKEDENDTE VGKKEVGKEE
//