ID G3V325_HUMAN Unreviewed; 749 AA.
AC G3V325;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 24-JAN-2024, entry version 87.
DE SubName: Full=ATP5MF-PTCD1 readthrough {ECO:0000313|Ensembl:ENSP00000400168.1};
GN Name=ATP5MF-PTCD1 {ECO:0000313|Ensembl:ENSP00000400168.1};
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000400168.1, ECO:0000313|Proteomes:UP000005640};
RN [1] {ECO:0000313|Ensembl:ENSP00000400168.1, ECO:0000313|Proteomes:UP000005640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=12853948; DOI=10.1038/nature01782;
RA Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H.,
RA Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K.,
RA Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A.,
RA Delehaunty K.D., Miner T.L., Nash W.E., Cordes M., Du H., Sun H.,
RA Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A.,
RA Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P.,
RA Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M.,
RA Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S.,
RA Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R.,
RA Strowmatt C., Latreille P., Miller N., Johnson D., Murray J.,
RA Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W.,
RA Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E.,
RA Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A.,
RA Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E.,
RA Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E.,
RA Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A.,
RA Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A.,
RA Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R.,
RA McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H.,
RA Wilson R.K.;
RT "The DNA sequence of human chromosome 7.";
RL Nature 424:157-164(2003).
RN [2] {ECO:0000313|Ensembl:ENSP00000400168.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR EMBL; AC004922; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AC073063; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AC090113; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; NP_001185808.1; NM_001198879.1.
DR AlphaFoldDB; G3V325; -.
DR SMR; G3V325; -.
DR IntAct; G3V325; 10.
DR STRING; 9606.ENSP00000400168; -.
DR SwissPalm; G3V325; -.
DR BioMuta; ATP5J2-PTCD1; -.
DR EPD; G3V325; -.
DR MassIVE; G3V325; -.
DR MaxQB; G3V325; -.
DR PaxDb; 9606-ENSP00000400168; -.
DR PeptideAtlas; G3V325; -.
DR PRIDE; G3V325; -.
DR ProteomicsDB; 32812; -.
DR Antibodypedia; 82380; 1 antibodies from 1 providers.
DR DNASU; 100526740; -.
DR Ensembl; ENST00000413834.5; ENSP00000400168.1; ENSG00000248919.7.
DR GeneID; 100526740; -.
DR KEGG; hsa:100526740; -.
DR UCSC; uc011kiw.3; human.
DR AGR; HGNC:38844; -.
DR CTD; 100526740; -.
DR GeneCards; ATP5MF-PTCD1; -.
DR HGNC; HGNC:38844; ATP5MF-PTCD1.
DR VEuPathDB; HostDB:ENSG00000248919; -.
DR eggNOG; KOG4092; Eukaryota.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_021952_0_0_1; -.
DR OMA; YALQVWQ; -.
DR OrthoDB; 1025498at2759; -.
DR PhylomeDB; G3V325; -.
DR TreeFam; TF324792; -.
DR BioGRID-ORCS; 100526740; 86 hits in 1010 CRISPR screens.
DR GenomeRNAi; 100526740; -.
DR Proteomes; UP000005640; Chromosome 7.
DR RNAct; G3V325; Protein.
DR Bgee; ENSG00000248919; Expressed in male germ line stem cell (sensu Vertebrata) in testis and 103 other cell types or tissues.
DR ExpressionAtlas; G3V325; baseline and differential.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR24014; 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2; 1.
DR PANTHER; PTHR24014:SF6; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL; 1.
DR Pfam; PF13812; PPR_3; 1.
DR Pfam; PF17177; PPR_long; 1.
DR PROSITE; PS51375; PPR; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000005640}.
FT DOMAIN 216..384
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 221..255
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 568..602
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 98..142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 721..749
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 98..124
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 749 AA; 84110 MW; 837C474BE4206BF9 CRC64;
MASVVPVKDK KLLEVKLGEL PSWILMRDFS PSGIFGAFQR GPGGTGKPEM DFVRLARLFA
RARPMGLFIL QHLDPCRARW AGGREGLMRP MWAPFSSSSS QLPLGQERQE NTGSLGSDPS
HSNSTATQEE DEEEEESFGT LSDKYSSRRL FRKSAAQFHN LRFGERRDEQ MEPEPKLWRG
RRNTPYWYFL QCKHLIKEGK LVEALDLFER QMLKEERLQP MESNYTVLIG GCGRVGYLKK
AFNLYNQMKK RDLEPSDATY TALFNVCAES PWKDSALQSA LKLRQQLQAK NFELNLKTYH
ALLKMAAKCA DLRMCLDVFK EIIHKGHVVT EETFSFLLMG CIQDKKTGFR YALQVWRLML
SLGLQPSRDS YNLLLVAARD CGLGDPQVAS ELLLKPREEA TVLQPPVSRQ RPRRTAQAKA
GNLMSAMLHV EALERQLFLE PSQALGPPEP PEARVPGKAQ PEVDTKAEPS HTAALTAVAL
KPPPVELEVN LLTPGAVPPT VVSFGTVTTP ADRLALIGGL EGFLSKMAEH RQQPDIRTLT
LLAEVVESGS PAESLLLALL DEHQVEADLT FFNTLVRKKS KLGDLEGAKA LLPVLAKRGL
VPNLQTFCNL AIGCHRPKDG LQLLTDMKKS QVTPNTHIYS ALINAAIRKL NYTYLISILK
DMKQNRVPVN EVVIRQLEFA AQYPPTFDRY QGKNTYLEKI DGFRAYYKQW LTVMPAEETP
HPWQKFRTKP QGDQDTGKEA DDGCALGGR
//