ID G4VPH0_SCHMA Unreviewed; 367 AA.
AC G4VPH0;
DT 14-DEC-2011, integrated into UniProtKB/TrEMBL.
DT 14-DEC-2011, sequence version 1.
DT 27-MAR-2024, entry version 68.
DE SubName: Full=U5 snrnp-specific protein-related {ECO:0000313|WBParaSite:Smp_025100.1};
OS Schistosoma mansoni (Blood fluke).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda;
OC Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma.
OX NCBI_TaxID=6183 {ECO:0000313|Proteomes:UP000008854, ECO:0000313|WBParaSite:Smp_025100.1};
RN [1] {ECO:0000313|Proteomes:UP000008854}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Puerto Rican {ECO:0000313|Proteomes:UP000008854};
RX PubMed=22253936; DOI=10.1371/journal.pntd.0001455;
RA Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A.,
RA De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C.,
RA Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J.,
RA Oliveira G., Otto T.D., Parker-Manuel S.J., Quail M.A., Wilson R.A.,
RA Zerlotini A., Dunne D.W., Berriman M.;
RT "A systematically improved high quality genome and transcriptome of the
RT human blood fluke Schistosoma mansoni.";
RL PLoS Negl. Trop. Dis. 6:E1455-E1455(2012).
RN [2] {ECO:0000313|WBParaSite:Smp_025100.1}
RP IDENTIFICATION.
RC STRAIN=Puerto Rican {ECO:0000313|WBParaSite:Smp_025100.1};
RG WormBaseParasite;
RL Submitted (DEC-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_018654981.1; XM_018789548.1.
DR AlphaFoldDB; G4VPH0; -.
DR STRING; 6183.G4VPH0; -.
DR EnsemblMetazoa; Smp_025100.1; Smp_025100.1; Smp_025100.
DR GeneID; 8352409; -.
DR KEGG; smm:Smp_025100; -.
DR WBParaSite; Smp_025100.1; Smp_025100.1; Smp_025100.
DR CTD; 8352409; -.
DR eggNOG; KOG0265; Eukaryota.
DR HOGENOM; CLU_000288_57_2_1; -.
DR InParanoid; G4VPH0; -.
DR OMA; IWDIRPY; -.
DR OrthoDB; 5476798at2759; -.
DR PhylomeDB; G4VPH0; -.
DR Proteomes; UP000008854; Unassembled WGS sequence.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR44006; U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN; 1.
DR PANTHER; PTHR44006:SF1; U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN; 1.
DR Pfam; PF00400; WD40; 7.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 3.
DR PROSITE; PS50082; WD_REPEATS_2; 6.
DR PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|ARBA:ARBA00023187};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008854};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 68..100
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 111..152
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 153..195
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 195..236
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 237..271
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 298..328
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 367 AA; 40476 MW; AA0CEE668FCD199F CRC64;
MDFKKPLAGV TSMSMVPLPS KKPRKDGSSL GITPFSNGMY KLNSQIIPAG QAGSIPRTSN
LLSPNMLLNG HESEVYCGKF SSDGSFLASA GFDRRILLWE TYGECENIAT MMGHGGAILD
LVLSSDDSVI YTASSDKSIA LWDTESAQRI KKFRGHENIV NSCAVARRGP QHVCSGSDDG
TIRLWDRRQK ACVQTFQNTY QVLSVTFSDT SEMIFSGGID NVVKGWDLRK LEASMLLSGH
TDTVTGLSVS PDGSFLLSNS MDNTLRMWDI RPFAPADRCT KIFTGHQHTF EKNLLRCAWS
IDNRRITSGS GDRYVHVWDV NTRQLVYKLP GHTASVNETA FHPTEPILLS VGSDKKIFLG
EILPCMY
//
