ID G5GH14_9FIRM Unreviewed; 1237 AA.
AC G5GH14;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=Nuclease SbcCD subunit C {ECO:0000256|ARBA:ARBA00013368};
GN ORFNames=HMPREF9333_00854 {ECO:0000313|EMBL:EHI56072.1};
OS Johnsonella ignava ATCC 51276.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae;
OC Johnsonella.
OX NCBI_TaxID=679200 {ECO:0000313|EMBL:EHI56072.1, ECO:0000313|Proteomes:UP000003011};
RN [1] {ECO:0000313|EMBL:EHI56072.1, ECO:0000313|Proteomes:UP000003011}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51276 {ECO:0000313|EMBL:EHI56072.1,
RC ECO:0000313|Proteomes:UP000003011};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Izard J., Blanton J.M.,
RA Baranova O.V., Dewhirst F.E., Young S.K., Zeng Q., Gargeya S.,
RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M.,
RA Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E.,
RA Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D.,
RA Howarth C., Larson L., Lui A., MacDonald P.J.P., Montmayeur A., Murphy C.,
RA Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., Shenoy N.,
RA Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Johnsonella ignava ATCC 51276.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Heterodimer of SbcC and SbcD. {ECO:0000256|ARBA:ARBA00011322}.
CC -!- SIMILARITY: Belongs to the SMC family. SbcC subfamily.
CC {ECO:0000256|ARBA:ARBA00006930}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EHI56072.1}.
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DR EMBL; ACZL01000014; EHI56072.1; -; Genomic_DNA.
DR RefSeq; WP_005540109.1; NZ_JH378830.1.
DR AlphaFoldDB; G5GH14; -.
DR STRING; 679200.HMPREF9333_00854; -.
DR PATRIC; fig|679200.3.peg.901; -.
DR eggNOG; COG0419; Bacteria.
DR HOGENOM; CLU_004785_1_2_9; -.
DR Proteomes; UP000003011; Unassembled WGS sequence.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006302; P:double-strand break repair; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038729; Rad50/SbcC_AAA.
DR PANTHER; PTHR32114; ABC TRANSPORTER ABCH.3; 1.
DR PANTHER; PTHR32114:SF2; ABC TRANSPORTER ABCH.3; 1.
DR Pfam; PF13476; AAA_23; 1.
DR Pfam; PF13558; SbcC_Walker_B; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF75712; Rad50 coiled-coil Zn hook; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW Reference proteome {ECO:0000313|Proteomes:UP000003011}.
FT DOMAIN 5..270
FT /note="Rad50/SbcC-type AAA"
FT /evidence="ECO:0000259|Pfam:PF13476"
FT COILED 706..733
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 801..856
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 979..1075
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1237 AA; 143367 MW; 4FDDB248D0EA3A1A CRC64;
MRPIKIKIRG FNSFLEEQEI DFEKLGKLGI FGIFGPTGSG KSSILDAITF ALYGKIARDS
SNSAKEQYIN INTDTARVIF EFGIKSTNEE KVYRIVREIK KDANKKTTTK QVKLIMLLPK
EEVLAEKEIE FRLAVGTIIG LEYDDFIKTV VLPQGGFNDF LKMEGRDRRV ILERLFNLEK
YGDVLEKKIK NRVQQYERED ERISGGLASY EGITNEAFNE VDKKLNEYIK KLENIKIKKE
NSDIKLELNK NIYERQLKID ELKLKLEERY KSEAFIKECK EKIERDRYSE LMLPLVSDYE
NSLDEKIKIS DELNDVNKGY KKLLADKEKI EKLYRQNEEK FNIEGKMLSE KIIKLRTLTG
DWDEYIKRKA EFDVHKSKYK QLDIEHTLNL KQQSEVYRQI EEQKMILYTE KEYLKKHEID
IELRQRLIKA CEFSNRLEAL EESFSKLNTS DDEIHKLISE LKGIINTTND SLNQVSDKIN
AVKAAEDDLK NNILSDSGAA RTMILKYKNL YEYIIKKGKA VNSLKNINTE FYSINNDYIK
LCSQFEAKTL KLDNLKALKE KLIKSEGLFN ISRDLKRGDI CPVCGNVIKD IKHKTQHGDF
NYKISSIEKN IKFIQEALKQ ELQKKSGFEG KIAVLNERKE KIIAEDNSFK LNESEAIYNF
IQRLKSVLRY GRNELDEVFE VFKAGVSDNI NNDTIKHIEN FILNDIIRLE NTAEDINRQL
HENQKKHENL LEQKHEISSN LSVYTAKIKI YEDTAKNNIN LKQSLKNDID EVKNTLYTVY
NDCGNNPGAR LDIILKSENI NKKIKIKIEE CEKCIQDLEE VRYKNESKLK SSEITKKEYE
TMLKEESRNT RLLEKKFLEI MEQLKSPADE LEYTTKQYSE LEYRFNSLKG DFERISEKSI
EAEKNSEILE KKAAYIDNIL EDKKSKLIEI FNKYNEDQYK TAEGSSIKTD SKELYSDKTM
CMEAIILKIK KSKLENNIKA ELLAKINDYE EDIRQLNGAL NEFQKYAGSK RVSLEEYKAV
EDENSNINDD LNSIQEEVIA IREKRSEILL KLEKIEELLR KKEAVSKNLS IARELKNTVG
ARKFAEFMAL KQLDYIASAA GERLFEISSG AYGLETAEDG TFKIRDYKNG GRLRNVKTLS
GGESFVVSLS LALSLSAHIQ LKGSAPLELF FLDEGFGTLD EELLEVVMDS LEKVYNDRMK
VGLISHVEYL KQRVPVRLIV RAAVSGEGGS KVSIEYG
//
