ID G7JWB5_MEDTR Unreviewed; 894 AA.
AC G7JWB5;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=PPR containing plant-like protein {ECO:0000313|EMBL:AES95976.1};
DE SubName: Full=Putative tetratricopeptide-like helical domain-containing protein {ECO:0000313|EMBL:RHN54917.1};
GN OrderedLocusNames=MTR_5g031740 {ECO:0000313|EMBL:AES95976.1};
GN ORFNames=MtrunA17_Chr5g0412071 {ECO:0000313|EMBL:RHN54917.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AES95976.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AES95976.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AES95976.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AES95976,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AES95976.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES95976,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AES95976}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES95976};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|Proteomes:UP000265566}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Jemalong A17 {ECO:0000313|Proteomes:UP000265566};
RX PubMed=30397259; DOI=10.1038/s41477-018-0286-7;
RA Pecrix Y., Staton S.E., Sallet E., Lelandais-Briere C., Moreau S.,
RA Carrere S., Blein T., Jardinaud M.F., Latrasse D., Zouine M., Zahm M.,
RA Kreplak J., Mayjonade B., Satge C., Perez M., Cauet S., Marande W.,
RA Chantry-Darmon C., Lopez-Roques C., Bouchez O., Berard A., Debelle F.,
RA Munos S., Bendahmane A., Berges H., Niebel A., Buitink J., Frugier F.,
RA Benhamed M., Crespi M., Gouzy J., Gamas P.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 4:1017-1025(2018).
RN [5] {ECO:0000313|EMBL:RHN54917.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN54917.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
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DR EMBL; CM001221; AES95976.1; -; Genomic_DNA.
DR EMBL; PSQE01000005; RHN54917.1; -; Genomic_DNA.
DR RefSeq; XP_003613018.1; XM_003612970.2.
DR AlphaFoldDB; G7JWB5; -.
DR PaxDb; 3880-AES95976; -.
DR EnsemblPlants; AES95976; AES95976; MTR_5g031740.
DR Gramene; AES95976; AES95976; MTR_5g031740.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_2_1; -.
DR OMA; FFRWIRR; -.
DR OrthoDB; 446379at2759; -.
DR Proteomes; UP000002051; Chromosome 5.
DR Proteomes; UP000265566; Chromosome 5.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 8.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 15.
DR PANTHER; PTHR47932; ATPASE EXPRESSION PROTEIN 3; 1.
DR PANTHER; PTHR47932:SF63; BOX HELICASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 5.
DR Pfam; PF13041; PPR_2; 5.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 17.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 154..188
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 224..258
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 259..293
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 294..328
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 329..363
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 364..398
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 399..433
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 434..468
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 469..503
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 504..538
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 539..573
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 574..608
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 609..643
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 644..678
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 740..774
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 775..809
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 845..879
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 894 AA; 102119 MW; 8AB789A832C17967 CRC64;
MRKSKPLFTL LHHNQNQNQN LFHLLLKPFS SLSPNSLQQD LPSQIFTILL QPQWRKNPSF
NTLIPSLTPT HLSSLFNNPN LHPLTALNFF KWIHYQHGFI HTVHSYQPLL FILVRNGFLR
AAENVRNSMI KSCVSSHEAR FVLNLLTHHE FSLSVTSYNR LFMVLSRFGL IDELNCLFKD
MLNDGVEPNL ISFNTMVNAH CKIGNVVVAK AYFCGLMKFG FCCDSFTYTS LILGYCKIHE
LGDAYKVFEI MPQEGCLRNE VSYTNLIHGF CEVGKIDEAL ELFFQMKEDG CFPDVPTYTV
LVAAFCEVGK ETEALKFFEE MVENGIEPNV YTYTVLIDYF CKVGKMDEGM EMLSTMLEKG
LVSSVVPFNA LIDGYCKRGM MEDAICVLDS MKLNKVCPNS RTYNELICGF CRKKSMDRAM
ALLNKMYENK LSPNLVTYNT LIHGLCKARV VDSAWRLHHL MIKDGFVPDQ RTFCAFIDCL
CKMGKVEQAH QVFESLKEKH AEANEFLYTA LIDGYCKAEK FSDAHLLFKR MLFEGCFPNS
ITFNVLLDGL RKEGKVEDAM SLVDVMGKFD AKPTVHTYTI LIEEILRESD FDRANMFLDQ
MISSGCQPNV VTYTAFIKAY CRQGRLLEAE EMVVKIKEEG ILLDSFIYDV LVNAYGCIGQ
LDSAFGVLIR MFDTGCEPSR QTYSILLKHL IFEKYNKEGM GLDLNSTNIS VDNANIWKIA
DFEIITMLFE KMVEQGCVPN VNTYSKLIKG LCKVEHLSLA FRLFNHMKES GISPSENIHN
SLLSSCCKLG MHEEALRLLD SMMEYNHLAH LESYKLLVCG LFEQGNQEKA EEIFRSLLSC
GYNYDEVVWK VLLDGLVRKG YVDECSQLRD IMEKTGCRLH SDTHTMLSQE LNGT
//
