ID G8A418_9NEIS Unreviewed; 380 AA.
AC G8A418;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE SubName: Full=Transcription termination factor Rho {ECO:0000313|EMBL:ADO40163.1};
DE Flags: Fragment;
GN Name=rho {ECO:0000313|EMBL:ADO40163.1};
OS Neisseriaceae bacterium NB-13.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae.
OX NCBI_TaxID=908812 {ECO:0000313|EMBL:ADO40163.1};
RN [1] {ECO:0000313|EMBL:ADO40163.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NB-13 {ECO:0000313|EMBL:ADO40163.1};
RA Davolos D.;
RT "DNA sequencing and phylogenetic analysis on the denitrifying genes from
RT taxa belonging to the Betaproteobacteria.";
RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the Rho family. {ECO:0000256|PROSITE-
CC ProRule:PRU01203}.
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DR EMBL; GU066896; ADO40163.1; -; Genomic_DNA.
DR AlphaFoldDB; G8A418; -.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0008186; F:ATP-dependent activity, acting on RNA; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006353; P:DNA-templated transcription termination; IEA:UniProtKB-KW.
DR CDD; cd04459; Rho_CSD; 1.
DR CDD; cd01128; rho_factor_C; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR HAMAP; MF_01884; Rho; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR000194; ATPase_F1/V1/A1_a/bsu_nucl-bd.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR041703; Rho_factor_ATP-bd.
DR InterPro; IPR011112; Rho_N.
DR InterPro; IPR011113; Rho_RNA-bd.
DR InterPro; IPR004665; Term_rho.
DR NCBIfam; TIGR00767; rho; 1.
DR PANTHER; PTHR46425; TRANSCRIPTION TERMINATION FACTOR RHO; 1.
DR PANTHER; PTHR46425:SF1; TRANSCRIPTION TERMINATION FACTOR RHO; 1.
DR Pfam; PF00006; ATP-synt_ab; 1.
DR Pfam; PF07498; Rho_N; 1.
DR Pfam; PF07497; Rho_RNA_bind; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51856; RHO_RNA_BD; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU01203}; Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transcription termination {ECO:0000256|ARBA:ARBA00022472}.
FT DOMAIN 30..105
FT /note="Rho RNA-BD"
FT /evidence="ECO:0000259|PROSITE:PS51856"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADO40163.1"
FT NON_TER 380
FT /evidence="ECO:0000313|EMBL:ADO40163.1"
SQ SEQUENCE 380 AA; 42800 MW; 5EC238D717AAF158 CRC64;
EQHGIENANR LRKQDLVFAI VRQMMKQGEA FTCSGTLEIL PDGFGFLRSS DTSYLAGPDD
IYVSPNQIRR FNLHTGDTIE GSVRVPKDNE RYFALVRLDK INDDPPEVCK HKILFENLTP
LFPTRQLKLE RDIKAEENIT SRAIDLVSPI GMGQRGLLVA PPKSGKTVML QNIAHAITAN
NPEVELIVLL IDERPEEVTE MTRSVRGEVV SSTFDEPATR HVQVAEMVIE KAKRMVEHKK
DVVILLDSIT RLARAYNTVV PASGKILTGG VDANALHRPK RFFGAARNIE EGGSLTIIAT
ALVETGSRMD DVIFEEFKGT GNMELHLDRR LAEKRVFPAI NINKSGTRRE ELLVPNDQLQ
RMWLLRKFLH PMDDIEATEF
//
