ID G9IGT7_9SPER Unreviewed; 589 AA.
AC G9IGT7;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2012, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Phytochrome P {ECO:0000313|EMBL:AEW26807.1};
DE Flags: Fragment;
GN Name=PHYP {ECO:0000313|EMBL:AEW26807.1};
OS Cycas clivicola.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Cycadidae; Cycadales; Cycadaceae; Cycas.
OX NCBI_TaxID=747353 {ECO:0000313|EMBL:AEW26807.1};
RN [1] {ECO:0000313|EMBL:AEW26807.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=22021670; DOI=10.1126/science.1209926;
RA Nagalingum N.S., Marshall C.R., Quental T.B., Rai H.S., Little D.P.,
RA Mathews S.;
RT "Recent synchronous radiation of a living fossil.";
RL Science 334:796-799(2011).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; JN655904; AEW26807.1; -; Genomic_DNA.
DR AlphaFoldDB; G9IGT7; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013654; PAS_2.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08446; PAS_2; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 137..295
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 519..589
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AEW26807.1"
FT NON_TER 589
FT /evidence="ECO:0000313|EMBL:AEW26807.1"
SQ SEQUENCE 589 AA; 64694 MW; 561B87B7B4C4B0EE CRC64;
TIQPFGCMLA VEEITFKIIA YSENAVEMLD LMPQSVPTME HEVLALGTDV RTLFTPSSAA
SLEKAAVAQE ISLMNPIWMR SRSSGKPFYA IVHRIDVGMV IDFEPAGDAA MSVAGAVQSQ
KLAVRAISRL QALPGGDIGL LCDTVAEDVR ELTGYDRVMV YKFHEDEHGE VVAEIRRSDL
EPYLGLHCPA TDIPQASRFL FMQNRVRMIC DCRATPVKVI QAAELNQPLC LVGSTLRAPH
GCHSQYMANM GSIASLVLAV IINANVKLWG LVVCHHTSAR AIPFPVRYAC EFLMQAFGLQ
LNMELQLAAQ MTEKHILRTQ TLLCDMLLRD APIGIVTQSP SIMDLVKCDG AALYYGGMFW
LLGVTPTEAQ IKDIADWLLE CHGDSTGLST DSLADAGYPG AASLGDAVCG MAAARITSKD
FLFWFRSHTA KEVKWGGAKH HPDDKDGRRM HPRSSFKAFL EVVKRRSLPW ENVEMDAIHS
LQLILRGSFQ DIDDSETKTM IHARLNDLRV QGIDELSSVA SEMVRLIETA TAPILAVDSG
GLVNGWNAKV AELTGLPVEE AMGMSLVHDL VYEESVETVE RLLYHALRG
//
