ID G9IHA3_9SPER Unreviewed; 590 AA.
AC G9IHA3;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2012, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Phytochrome P {ECO:0000313|EMBL:AEW26973.1};
DE Flags: Fragment;
GN Name=PHYP {ECO:0000313|EMBL:AEW26973.1};
OS Zamia neurophyllidia.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Cycadidae; Cycadales; Zamiaceae; Zamia.
OX NCBI_TaxID=115892 {ECO:0000313|EMBL:AEW26973.1};
RN [1] {ECO:0000313|EMBL:AEW26973.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=22021670; DOI=10.1126/science.1209926;
RA Nagalingum N.S., Marshall C.R., Quental T.B., Rai H.S., Little D.P.,
RA Mathews S.;
RT "Recent synchronous radiation of a living fossil.";
RL Science 334:796-799(2011).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; JN656077; AEW26973.1; -; Genomic_DNA.
DR AlphaFoldDB; G9IHA3; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013654; PAS_2.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08446; PAS_2; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 137..295
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 520..590
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AEW26973.1"
FT NON_TER 590
FT /evidence="ECO:0000313|EMBL:AEW26973.1"
SQ SEQUENCE 590 AA; 65035 MW; 4379E6CFB4EE724B CRC64;
KIQPLGCMLA VEERTFRIIA YSENAVGMLD LAPQSVPTME RELLTIGTDV RTLFTPASAL
SLEKAAAAQE ISLMNPVWMH SKSSGKPFYA ILHRIDVGMV IDFEPVGGAA MSVAGAAQSQ
KLAVRAISRL QALPGGDIGL LCDTVVEDVR ELTGYDRVMV YRFHEDEHGE VVAEIRRSDL
EPYLGLHYPA TDIPQASRFL FMQNRVRMIC DCRATPVRVI QAAELRQPLC LVGSTLRAPH
GCHAQYMANM GSVASLVMAV VMNVNMKLWG LVVCHHTSPR AVPFPVRYAC EFLMQAFGLQ
LNMELQLAAQ LTEKHILKTQ TLLCDMLLRD APIGIVTQSP SIMDLVKCDG AALYYGGMVW
MLGVTPTEAQ IKDIADWLLE CHGDWTGLST DSLADAGYPG TASLGDAVCG MAAARITAKD
FLFWFRSHTA KEIKWGGAKH HPDDKDEGRR MHPRSSFKAF LEVVKRRSLP WENVEMDAIH
SLQLILRGSF QDIDDSKTKT MIHSRLTDLR LQSMDELSSV ASEMVRLIET ATAPILAVDS
GGFVNGWNAK LAELTGLPVG EAMGKSLVCD LIYEESMETV ERLLHHALRG
//
