ID G9WKJ5_9FIRM Unreviewed; 720 AA.
AC G9WKJ5;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2012, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126};
GN ORFNames=HMPREF9625_01902 {ECO:0000313|EMBL:EHL13837.1};
OS Oribacterium parvum ACB1.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae;
OC Oribacterium.
OX NCBI_TaxID=796943 {ECO:0000313|EMBL:EHL13837.1, ECO:0000313|Proteomes:UP000018461};
RN [1] {ECO:0000313|Proteomes:UP000018461}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACB1 {ECO:0000313|Proteomes:UP000018461};
RG The Broad Institute Genome Sequencing Platform;
RG The Broad Institute Genome Sequencing Center for Infectious Disease;
RA Cuomo C., Becnel J., Sanscrainte N., Young S.K., Zeng Q., Gargeya S.,
RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M.,
RA Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E.,
RA Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D.,
RA Howarth C., Larson L., Lui A., MacDonald P.J.P., Montmayeur A., Murphy C.,
RA Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., Shenoy N.,
RA Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.;
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000018461}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACB1 {ECO:0000313|Proteomes:UP000018461};
RG The Broad Institute Genomics Platform;
RG The Broad Institute Genome Sequencing Center for Infectious Disease;
RA Earl A., Ward D., Feldgarden M., Gevers D., Sizova M., Hazen A.,
RA Epstein S., Walker B., Young S., Zeng Q., Gargeya S., Fitzgerald M.,
RA Haas B., Abouelleil A., Allen A.W., Alvarado L., Arachchi H.M.,
RA Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A.,
RA Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A., Larimer J.,
RA McCowan C., Murphy C., Pearson M., Poon T.W., Priest M., Roberts A.,
RA Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Oribacterium sp. ACB1.";
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EHL13837.1}.
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DR EMBL; AFZC01000002; EHL13837.1; -; Genomic_DNA.
DR RefSeq; WP_009535740.1; NZ_KE148312.1.
DR AlphaFoldDB; G9WKJ5; -.
DR STRING; 796943.HMPREF9625_01902; -.
DR GeneID; 84784739; -.
DR PATRIC; fig|796943.3.peg.253; -.
DR HOGENOM; CLU_009833_0_2_9; -.
DR Proteomes; UP000018461; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000018461}.
FT DOMAIN 648..717
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT COILED 46..73
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 720 AA; 80358 MW; 6A16385CE99BC762 CRC64;
MNIIQKIAED LSLKKMQVEA AVQLLDEGNT VPFIARYRKE ATHGLNDEEL RSLEEKLQYL
RNLEERRESI LNSIAEQGKL TEELKAQIEA ADTAVRLEDL YLPYKKKRRT RGMIAREKGL
EGLAKAILTP GVNPVKEAEK YLSEEKEVCS VEEALNYAKD ILAEEFSENA SYREWIRNKT
MELGSISSSK KETEENPDAK TYEMYFDYEE KVKTIPGYRT LAINRGEKEK VLSVKLNFPQ
EEILAYLEKQ AGKALQGENL RLLQEAVQDS FKRLISPSIE TEIRNILTEK AEDGAIAIFA
DNLKQLLMQA PIVGKVVLGW DPGFRTGCKI AVVDPTGKVL DTTVIYPTPP KNQVKEAMAA
IHKLIEKHKV DIIALGNGTA SRESEKVISD YIHETKSKVQ YVIVNEAGAS VYSASKLATE
EFPNFDTGER SSTSMARRLQ DPLAELVKIE PKAIGVGQYQ HDMNQNKLEE QLNNTVEDCV
NHVGVDLNTA SAALLSYISG INKTLAKNIV VYREENGAFK SRKELLKVAK LGPKAFEQSA
GFLRIREGKE VLDRTSVHPE SYQKTKELLS LLNLNEKDIA EGKGKDIAKM ISALPGGMKA
LEEKLAIGSF TLKDIVEALA KPGRDPREDV PAPILRSDVL ELSDLKEGMI LEGTVRNVLD
FGAFVDIGVH QDGLVHISAL SKKFVKHPLD VVKLGDIVKV KILSVDMERK KISLSMKDAE
//
