ID H0TIM5_9BRAD Unreviewed; 669 AA.
AC H0TIM5;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2012, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=Diguanylate cyclase/phosphodiesterase {ECO:0008006|Google:ProtNLM};
GN ORFNames=BRAS3843_1670020 {ECO:0000313|EMBL:CCE06313.1};
OS Bradyrhizobium sp. STM 3843.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Bradyrhizobium.
OX NCBI_TaxID=551947 {ECO:0000313|EMBL:CCE06313.1, ECO:0000313|Proteomes:UP000002686};
RN [1] {ECO:0000313|Proteomes:UP000002686}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=STM3843 {ECO:0000313|Proteomes:UP000002686};
RX PubMed=24704842; DOI=10.3390/genes3010035;
RA Mornico D., Miche L., Bena G., Nouwen N., Vermeglio A., Vallenet D.,
RA Smith A.A., Giraud E., Medigue C., Moulin L.;
RT "Comparative genomics of aeschynomene symbionts: insights into the
RT ecological lifestyle of nod-independent photosynthetic bradyrhizobia.";
RL Genes (Basel) 3:35-61(2011).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCE06313.1}.
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DR EMBL; CAFK01000076; CCE06313.1; -; Genomic_DNA.
DR RefSeq; WP_008968835.1; NZ_CAFK01000076.1.
DR AlphaFoldDB; H0TIM5; -.
DR OrthoDB; 9814202at2; -.
DR Proteomes; UP000002686; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000002686};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 36..55
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 61..83
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 104..123
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 129..147
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 152..170
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 176..198
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 259..395
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 404..654
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 669 AA; 73852 MW; 2D43903896107F2F CRC64;
MRDLRRDLAR ARELFRVPAD NPELTRAQFL AFSKQVPLLY FILITNSIAV AYTFLPLAPA
WLTISTPALL TSLTGIRTIW WLRQRNVVLD DAEILRNLRV TNRIAGPIGA LFVVWSFALF
PYGDPFAKGQ IAFYMAVTVI GIIFCLMHLR SAALIVTLVV IVPFVIYFMA TREHALQAIA
VNQLLVSGAM VTVLFIYYRD FADLVASRKS LLAEQAATQA LSDENFRLAN LDSLTDLPNR
RRFFSELTRF FADAERDGTR LAVGIIDLDG FKPINDTYGH TVGDRVLIEA ARRLGEVCDG
CGPRVHLARL GGDEFGLVVG DNPTDEDLLA LGRQITDRIK LPYQLDTAHT GLSCSMGFAL
YPRSATAAEP LYECADYALY HAKRHVRGGA VIFSSELEAE IRSRSVIEHM LRTADFETEM
QLAFQPIIDV RSERTRGFEV LARWQSPKLG LVSPGDFIPA AERTGVIRAL TRVLLVKALA
AAATWPDDIR ISFNLSAHDI CSPDGILHLI SAIEASGVAA GRIEFEITET AVTYDFSRAE
HSIAALKAMG CGISLDDFGT GYSSLSHVHR LPLDKLKVDR SFVADINSNP ISHKIVKSLT
GLCADMEIAC IGEGVETEAQ LESLRRLGCD FVQGYYFAKP MPADAVAGFL AEERRRVSET
STQKRATGA
//
