ID H0TQ76_9BRAD Unreviewed; 880 AA.
AC H0TQ76;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2012, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS and GAF domains {ECO:0000313|EMBL:CCE08614.1};
GN ORFNames=BRAS3843_2770096 {ECO:0000313|EMBL:CCE08614.1};
OS Bradyrhizobium sp. STM 3843.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Bradyrhizobium.
OX NCBI_TaxID=551947 {ECO:0000313|EMBL:CCE08614.1, ECO:0000313|Proteomes:UP000002686};
RN [1] {ECO:0000313|Proteomes:UP000002686}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=STM3843 {ECO:0000313|Proteomes:UP000002686};
RX PubMed=24704842; DOI=10.3390/genes3010035;
RA Mornico D., Miche L., Bena G., Nouwen N., Vermeglio A., Vallenet D.,
RA Smith A.A., Giraud E., Medigue C., Moulin L.;
RT "Comparative genomics of aeschynomene symbionts: insights into the
RT ecological lifestyle of nod-independent photosynthetic bradyrhizobia.";
RL Genes (Basel) 3:35-61(2011).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCE08614.1}.
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DR EMBL; CAFK01000198; CCE08614.1; -; Genomic_DNA.
DR RefSeq; WP_008971126.1; NZ_CAFK01000198.1.
DR AlphaFoldDB; H0TQ76; -.
DR OrthoDB; 9814202at2; -.
DR Proteomes; UP000002686; Unassembled WGS sequence.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 2.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR012226; Diguanyl_cyclase/Pdiesterase.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF11; DIGUANYLATE CYCLASE DGCE-RELATED; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF13426; PAS_9; 1.
DR PIRSF; PIRSF005925; Dos; 2.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002686}.
FT DOMAIN 129..174
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 203..255
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 448..580
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 589..843
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
FT REGION 860..880
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 880 AA; 95392 MW; B782672B51A25C6C CRC64;
MAEPADVLLA ALEHSSEAVV ILDSDLCVHH ANAAAERLFR ADGAALVGSD VSRLGIPRDH
AIFRAPAGAD HALPDRGESS PRPVEIKLRP ADGSCICVSL TLSRLEIDGT IWLALFARDV
TAEVERRDRL ALLHSVADRT NRAMVVTDHE LKIIYTNAAF AEMFGYQPGE AIGRRADELM
VGPCTDRNAI EKLKLWLAED RGGEEEVLVY DKSGREIWVT AYVKAHRNRR GAVKYLVGLL
SDISESKQLR SLQQLITTAL ADNVPIAEIC DRLCRRVEEL APDVVCSILH VDADGLVHPL
GGPSLPADYS AALDGIPIGP EVGSCGTAAY LCEPVLAQDI DADPRWQPYK AGPLAAGLRA
CWSTPIKGKD GRVIGTFAFY FRECRGPSRW HEQIVEACVH LGALAIERQE AMSAVARMAY
YDMLTGLPNR AHIRSLIATA LEACPEGGHV AVAYLDADNF KDVNDTLGHA AGDEFLIAFA
KRLRGQLRPG DMLGRLGGDE FLVLLPNRDS IEASLMAARI TAALAVPLTI GSRQVPMSAS
MGLSLYPDNA SDIDTLIKQS DAAMYKAKSA GRATYRFFSA DLDKIAEQRL MHSTALRDAV
ANEALKLYYQ PQIRSRDGAI HGVEALARWH DEVLGDVSPA KFIPLAEECG LIEQIGLWSM
REACRQMAAW QRAGLDIPSV SVNLSPINFQ NVNLAARVAQ ILNEYGLPPK RLMLEITEGV
FLNERATVVA TMNELRNLGV GLSLDDFGTG YSSLSRLAQL PISELKIDRS FMRDVEDNPG
TRAIVTAVVR VGQSMNLAVV AEGVETEGQR HLLDELGCDA LQGFLYARPL PATGFGRWLL
EHSASRASLM LKQIGRALAA PSSKPSGVPT PRKAGSVPAA
//
