ID H2IQF2_RAHAC Unreviewed; 776 AA.
AC H2IQF2;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 21-MAR-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=Transcriptional accessory protein {ECO:0000313|EMBL:AEX50212.1};
GN OrderedLocusNames=Rahaq2_0265 {ECO:0000313|EMBL:AEX50212.1};
OS Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 /
OS NCIMB 13365 / CIP 78.65).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Rahnella.
OX NCBI_TaxID=745277 {ECO:0000313|EMBL:AEX50212.1, ECO:0000313|Proteomes:UP000009010};
RN [1] {ECO:0000313|EMBL:AEX50212.1, ECO:0000313|Proteomes:UP000009010}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 /
RC CIP 78.65 {ECO:0000313|Proteomes:UP000009010};
RX PubMed=22582378; DOI=10.1128/JB.00380-12;
RA Martinez R.J., Bruce D., Detter C., Goodwin L.A., Han J., Han C.S.,
RA Held B., Land M.L., Mikhailova N., Nolan M., Pennacchio L., Pitluck S.,
RA Tapia R., Woyke T., Sobecky P.A.;
RT "Complete Genome Sequence of Rahnella aquatilis CIP 78.65.";
RL J. Bacteriol. 194:3020-3021(2012).
RN [2] {ECO:0000313|Proteomes:UP000009010}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 /
RC CIP 78.65 {ECO:0000313|Proteomes:UP000009010};
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Ovchinnikova G., Held B., Detter J.C., Han C., Tapia R.,
RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sobecky P.,
RA Martinez R., Woyke T.;
RT "Complete sequence of chromosome of Rahnella aquatilis CIP 78.65.";
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP003244; AEX50212.1; -; Genomic_DNA.
DR RefSeq; WP_014333520.1; NZ_JMPO01000138.1.
DR AlphaFoldDB; H2IQF2; -.
DR STRING; 745277.Rahaq2_0265; -.
DR GeneID; 61510415; -.
DR KEGG; raq:Rahaq2_0265; -.
DR PATRIC; fig|745277.3.peg.255; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_6; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000009010; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009010}.
FT DOMAIN 650..719
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 720..776
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 776 AA; 85613 MW; DA74494A075111C2 CRC64;
MNDQLSRIIA SELQVRPEQV ASVVRLLDEG NTVPFIARYR KEVTGGLDDT QLRQLDTRLG
YLRELEDRRQ TILKSIEEQG KLSDDLAKAI NTTLSKTELE DLYLPFKPKR RTRGQIAIEA
GLEPLAELLW NAPQNEPDAA AAQFVDAEKG VADTKAALDG ARYILMERFA EDASLLAKVR
DYLWKNAHLT SRMVEGKEQE GAKFRDYFDH HEPISQVPSH RALAMFRGRN EGVLQLALNA
DPQHDEPPKE SYAEQLIIDH LGLRLNNAPA DVWRRAVVNW TWRIKVLLHL ETELMGTVRE
RAEDEAINVF ARNMHDLLMA APAGMRATMG LDPGLRTGVK VAVVDNTGKL VDIDTVYPHT
GQAAKAAQQV AALCIKHNVE LVAIGNGTAS RETERFFLEL QKQFPAVKAQ KVIVSEAGAS
VYSASELAAL EFPDLDVSIR GAVSIARRLQ DPLAELVKID PKSIGVGQYQ HDVSQSQLAK
KLDTVVEDCV NAVGVDLNTA SVPLLTRVAG LTRMMAQNIV NWRDENGQFR NREQLLKVSR
LGPKAFEQCA GFLRINHGDN PLDASTVHPE TYPVVERILA ATQMALKELM GDSNVLRGLK
ASEFTDEQFG VPTVTDIIKE LEKPGHDPRP EFKTATFADG VETMNDLMPG MILEGSVTNV
TNFGAFVDIG VHQDGLVHIS SLANKFVEDP HTVVKAGDIV KVKVMEVDLQ RKRIALTMRL
DEQPGEAPAR RSSAPAADTR DNQKRHSPNK PAGRNTVPAG NNAMADALAA ALGKKR
//
