ID H2J049_RAHAC Unreviewed; 263 AA.
AC H2J049;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 21-MAR-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN OrderedLocusNames=Rahaq2_3493 {ECO:0000313|EMBL:AEX53292.1};
OS Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 /
OS NCIMB 13365 / CIP 78.65).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Rahnella.
OX NCBI_TaxID=745277 {ECO:0000313|EMBL:AEX53292.1, ECO:0000313|Proteomes:UP000009010};
RN [1] {ECO:0000313|EMBL:AEX53292.1, ECO:0000313|Proteomes:UP000009010}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 /
RC CIP 78.65 {ECO:0000313|Proteomes:UP000009010};
RX PubMed=22582378; DOI=10.1128/JB.00380-12;
RA Martinez R.J., Bruce D., Detter C., Goodwin L.A., Han J., Han C.S.,
RA Held B., Land M.L., Mikhailova N., Nolan M., Pennacchio L., Pitluck S.,
RA Tapia R., Woyke T., Sobecky P.A.;
RT "Complete Genome Sequence of Rahnella aquatilis CIP 78.65.";
RL J. Bacteriol. 194:3020-3021(2012).
RN [2] {ECO:0000313|Proteomes:UP000009010}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 /
RC CIP 78.65 {ECO:0000313|Proteomes:UP000009010};
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Ovchinnikova G., Held B., Detter J.C., Han C., Tapia R.,
RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sobecky P.,
RA Martinez R., Woyke T.;
RT "Complete sequence of chromosome of Rahnella aquatilis CIP 78.65.";
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003244; AEX53292.1; -; Genomic_DNA.
DR RefSeq; WP_015698373.1; NZ_JMPO01000117.1.
DR AlphaFoldDB; H2J049; -.
DR STRING; 745277.Rahaq2_3493; -.
DR GeneID; 61513481; -.
DR KEGG; raq:Rahaq2_3493; -.
DR PATRIC; fig|745277.3.peg.3349; -.
DR eggNOG; COG1396; Bacteria.
DR HOGENOM; CLU_057862_2_1_6; -.
DR OrthoDB; 5346389at2; -.
DR Proteomes; UP000009010; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 3.30.450.180; -; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR041413; MLTR_LBD.
DR PANTHER; PTHR35010:SF2; BLL4672 PROTEIN; 1.
DR PANTHER; PTHR35010; BLL4672 PROTEIN-RELATED; 1.
DR Pfam; PF13560; HTH_31; 1.
DR Pfam; PF17765; MLTR_LBD; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009010}.
FT DOMAIN 42..89
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 263 AA; 29659 MW; 37DA812FC7D5D720 CRC64;
MIDNAESLSG PKALGMFLRT HRERVTPEMV GLPGSSRRRT SGLRREELAQ ISGISATWYT
WIEQGRDVSI SAATLDSLAK ALRLEPAARE YLFSLASVKD PQALPSSGAP DDSLKDCVNQ
LTCPGYLLDS GWNVLAWNPQ AGALFSGWLG VDEHPNLLDF MFLHPLAREL VTNWPERAKR
VVAEFRAETS HYAHSEAVRQ SVINLRERSH EFNQWWSQQE VLAREGGERR FHHPLQGEIC
YRQQTFFPAG YAECKLVILV PET
//
