ID H3A721_LATCH Unreviewed; 281 AA.
AC H3A721;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE SubName: Full=SRY-box transcription factor 19a {ECO:0000313|Ensembl:ENSLACP00000005442.1};
GN Name=LOC102355249 {ECO:0000313|Ensembl:ENSLACP00000005442.1};
OS Latimeria chalumnae (Coelacanth).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Coelacanthiformes; Coelacanthidae; Latimeria.
OX NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000005442.1, ECO:0000313|Proteomes:UP000008672};
RN [1] {ECO:0000313|Proteomes:UP000008672}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT "The draft genome of Latimeria chalumnae.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLACP00000005442.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; AFYH01164162; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; H3A721; -.
DR STRING; 7897.ENSLACP00000005442; -.
DR Ensembl; ENSLACT00000005490.1; ENSLACP00000005442.1; ENSLACG00000004841.1.
DR eggNOG; KOG0527; Eukaryota.
DR GeneTree; ENSGT00940000165992; -.
DR HOGENOM; CLU_021123_0_0_1; -.
DR InParanoid; H3A721; -.
DR OMA; MYSLMEH; -.
DR TreeFam; TF351735; -.
DR Proteomes; UP000008672; Unassembled WGS sequence.
DR Bgee; ENSLACG00000004841; Expressed in pectoral fin and 3 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd22028; HMG-box_SoxA_SoxB_SoxG; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR10270; SOX TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR10270:SF313; TRANSCRIPTION FACTOR SOX-21; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00267}; Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000008672}.
FT DOMAIN 39..107
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 39..107
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 106..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 14..33
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 281 AA; 31255 MW; FA4D82160A46E39C CRC64;
TMYMIEQELK PPMPQSMNGG SQGANQTSKS SPPDPMDKVK RPMNAFMVWS RGQRRKMAQE
NPKMHNSEIS KRLGAEWKLL SDAEKRPFID EAKRLRAMHM KDYPDYKYRP RRKNKPTLKK
EPPGKYPLGA GTLLAQGPGG SPRMDSYAWG HTGGYAAMQS DPLTYSQQLH RYDLSALQYP
PGMATAQGYM NGTNSYSTMS YGGSAQQSVM PMVKTEQLSP STPGAPAHHR GGLQGDLRDM
ISMYSIPSSD TTDLSGQRGY HTPPQHYQNL TLSGTVPLTH L
//
