ID H3AVG9_LATCH Unreviewed; 522 AA.
AC H3AVG9;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=HTH CENPB-type domain-containing protein {ECO:0000259|PROSITE:PS51253};
GN Name=LOC102365266 {ECO:0000313|Ensembl:ENSLACP00000013640.1};
OS Latimeria chalumnae (Coelacanth).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Coelacanthiformes; Coelacanthidae; Latimeria.
OX NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000013640.1, ECO:0000313|Proteomes:UP000008672};
RN [1] {ECO:0000313|Proteomes:UP000008672}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT "The draft genome of Latimeria chalumnae.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLACP00000013640.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; AFYH01159217; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; H3AVG9; -.
DR Ensembl; ENSLACT00000013737.1; ENSLACP00000013640.1; ENSLACG00000012006.1.
DR eggNOG; KOG3105; Eukaryota.
DR GeneTree; ENSGT00940000163615; -.
DR HOGENOM; CLU_018294_0_4_1; -.
DR InParanoid; H3AVG9; -.
DR OMA; INERDWI; -.
DR TreeFam; TF101131; -.
DR Proteomes; UP000008672; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR004875; DDE_SF_endonuclease_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR006600; HTH_CenpB_DNA-bd_dom.
DR InterPro; IPR007889; HTH_Psq.
DR PANTHER; PTHR19303:SF74; PROTEIN PDC2; 1.
DR PANTHER; PTHR19303; TRANSPOSON; 1.
DR Pfam; PF04218; CENP-B_N; 1.
DR Pfam; PF03184; DDE_1; 1.
DR Pfam; PF03221; HTH_Tnp_Tc5; 1.
DR SMART; SM00674; CENPB; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS51253; HTH_CENPB; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008672}.
FT DOMAIN 74..145
FT /note="HTH CENPB-type"
FT /evidence="ECO:0000259|PROSITE:PS51253"
FT REGION 455..482
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 522 AA; 59360 MW; D10BB7E8F7FB4620 CRC64;
SKMPPKAIKM PGSYRRNELT LKEKVKLIRE SEKTGKPHRE LAMEFGIGKT QVGAILKKKR
TYLDEWGKNA NSDAKRLCIR SPYEEVNVLT WQWYQRARAP NLPISGPLIA EQALKFAASL
GLSTFKASDG WLSNFKKKHK LTGAVASGES VDVDKDTCDD WLARLPDITQ GYQPRDIFNL
DETGVFYRAL PDRSLAPTEE ERDGSRHCKD RLTACLLVNQ CGEFEKTLVI GRSAKPRCFR
NIKLEDLPVV YKHNKKACMT NDIYNDYLTA FDKRMERQER QVLLFLDRTP SHTRLKLKNT
KVMFLPANRM SLLQPLNQGI IQNIKQHYRK RMLRYLLTQI NDSPPNSTNA ATDLAKDIDI
HNAIIWLYYA VKDVLPTAVT KCFAKAGFPT APDETLVTDD DDDSELQGVL TEVVEKLQLP
EPMTARDYLE VDADTPQSEG LSTGWESQLL EDFVDDRSGS PTVESESETE EEGEPQKTSY
KSHQEVLTAL RDLQVWAMEK GLTEVLTHFT AAEDLIQKDS IQ
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