ID H3AX00_LATCH Unreviewed; 607 AA.
AC H3AX00;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Glycoprotein nmb {ECO:0000313|Ensembl:ENSLACP00000014171.1};
GN Name=GPNMB {ECO:0000313|Ensembl:ENSLACP00000014171.1};
OS Latimeria chalumnae (Coelacanth).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Coelacanthiformes; Coelacanthidae; Latimeria.
OX NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000014171.1, ECO:0000313|Proteomes:UP000008672};
RN [1] {ECO:0000313|Proteomes:UP000008672}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT "The draft genome of Latimeria chalumnae.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLACP00000014171.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PMEL/NMB family.
CC {ECO:0000256|ARBA:ARBA00025776}.
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DR EMBL; AFYH01080484; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01080485; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01080486; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01080487; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; H3AX00; -.
DR STRING; 7897.ENSLACP00000014171; -.
DR Ensembl; ENSLACT00000014270.1; ENSLACP00000014171.1; ENSLACG00000012475.2.
DR eggNOG; ENOG502QVWX; Eukaryota.
DR GeneTree; ENSGT00950000183188; -.
DR HOGENOM; CLU_017264_0_0_1; -.
DR InParanoid; H3AX00; -.
DR OMA; HGWRKWN; -.
DR TreeFam; TF334865; -.
DR Proteomes; UP000008672; Unassembled WGS sequence.
DR Bgee; ENSLACG00000012475; Expressed in pectoral fin and 1 other cell type or tissue.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00146; PKD; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR045219; PKAT.
DR InterPro; IPR046846; PKAT_KLD.
DR InterPro; IPR022409; PKD/Chitinase_dom.
DR InterPro; IPR000601; PKD_dom.
DR InterPro; IPR035986; PKD_dom_sf.
DR PANTHER; PTHR11861; MELANOCYTE PROTEIN PMEL 17-RELATED; 1.
DR PANTHER; PTHR11861:SF11; TRANSMEMBRANE GLYCOPROTEIN NMB; 1.
DR Pfam; PF20433; PKAT_KLD; 1.
DR Pfam; PF00801; PKD; 1.
DR SMART; SM00089; PKD; 1.
DR SUPFAM; SSF49299; PKD domain; 1.
DR PROSITE; PS50093; PKD; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008672};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..18
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 19..607
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003579583"
FT TRANSMEM 537..557
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 287..324
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
FT REGION 342..394
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 607 AA; 67766 MW; 4707D2E21CDB34D7 CRC64;
STCLLLPMLI PALGMFSGNQ FYKGFRDAMP SGRSQLLARS HVSSVRNHQT LQGWQSDNNT
WNENLYPIWK TNDSKWKNYW RGGKVIAHLT SDSPALVGSN VTFSVTLQFP RCQKENKNGD
LVYDDNCKSD SSVFPGEFVY NWTSWLEQYG WGVCSNILRC NVFPDGKPFP FHHDWRRRNF
VFVFHTLGQY YQKTSSSSAT ISLNTMNITL GTHLMEVAVY HKRRYRNYIP VATVTTLFDV
TDVDKIPFFV QISQKNDVNI FDKVFIKDLK VIFDVRIHDP SNYLKNSNVS YKWDFGDSRR
LASNSSVVTH TYTRVGKFHP QLTIRAIIPV PCGPVTQTPF PFTSESTTAS ATTTEQMTSQ
TTRDPTTMTS QTTPSIPTSA ATETSTETKT SLPTARFPQP AGCQLYRYGQ YNTSLIIVEG
ITSVSIVQVT SVVEVSASQV TNAIMEFVVT CQGGKKKKNS IPTDVCTIIL DFSCTTTKDV
FCDSVPPADK CQLTLQRAFN QTEPFCVNIT LSDGGSLAAT STLVSIGKAT RNTMLEAVLI
VGGFLGFLVI IIAAVYYKRY KAYTPVDGNG QNVVHLEGLS VYFNRLKAIL LTGNEEQNLL
LKETTGI
//