ID H3B9M9_LATCH Unreviewed; 241 AA.
AC H3B9M9;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 68.
DE SubName: Full=GS homeobox 1 {ECO:0000313|Ensembl:ENSLACP00000018600.1};
GN Name=GSX1 {ECO:0000313|Ensembl:ENSLACP00000018600.1};
OS Latimeria chalumnae (Coelacanth).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Coelacanthiformes; Coelacanthidae; Latimeria.
OX NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000018600.1, ECO:0000313|Proteomes:UP000008672};
RN [1] {ECO:0000313|Proteomes:UP000008672}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT "The draft genome of Latimeria chalumnae.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLACP00000018600.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
CC ECO:0000256|RuleBase:RU000682}.
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DR EMBL; AFYH01043705; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_005993013.1; XM_005992951.1.
DR AlphaFoldDB; H3B9M9; -.
DR STRING; 7897.ENSLACP00000018600; -.
DR Ensembl; ENSLACT00000018733.1; ENSLACP00000018600.1; ENSLACG00000016379.1.
DR GeneID; 102367218; -.
DR KEGG; lcm:102367218; -.
DR CTD; 219409; -.
DR eggNOG; KOG0489; Eukaryota.
DR GeneTree; ENSGT00940000154361; -.
DR HOGENOM; CLU_077153_0_0_1; -.
DR InParanoid; H3B9M9; -.
DR OMA; GACHSRK; -.
DR OrthoDB; 728401at2759; -.
DR TreeFam; TF315938; -.
DR Proteomes; UP000008672; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR042191; GSH1/2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR020479; Homeobox_metazoa.
DR PANTHER; PTHR47421:SF2; GS HOMEOBOX 1; 1.
DR PANTHER; PTHR47421; GS HOMEOBOX 2; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00024; HOMEOBOX.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000008672}.
FT DOMAIN 135..195
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 137..196
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 193..212
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 221..241
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 226..241
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 241 AA; 26802 MW; 704DD26B9C231944 CRC64;
MPRSFLVDSL ILREANEKKN ENNPPLFPYA VHPSHSLHGL ASGSCHSRKS GLLCVCPLCV
TASQLHPSPP AIPLLKASFP TFTSQYCHST LARQHSTSAA VSVTHGPSIY QAAYPLPDPR
QFHCLSIDGN SNQLHSSKRM RTAFTSTQLL ELEREFASNM YLSRLRRIEI ATYLNLSEKQ
VKIWFQNRRV KHKKEGKSGS HRTGSHNCKC SSLSARCSEE EDLAMSPSSS GKDDRDLDVT
P
//