ID H3CPU5_TETNG Unreviewed; 1334 AA.
AC H3CPU5;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE SubName: Full=Leucine-rich pentatricopeptide repeat containing {ECO:0000313|Ensembl:ENSTNIP00000010278.1};
OS Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon
OS nigroviridis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon.
OX NCBI_TaxID=99883 {ECO:0000313|Ensembl:ENSTNIP00000010278.1, ECO:0000313|Proteomes:UP000007303};
RN [1] {ECO:0000313|Proteomes:UP000007303}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15496914; DOI=10.1038/nature03025;
RA Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N.,
RA Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S.,
RA Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C.,
RA Salanoubat M., Levy M., Boudet N., Castellano S., Anthouard V., Jubin C.,
RA Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L.,
RA Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P.,
RA Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C.,
RA McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R.,
RA Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D.,
RA Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W.,
RA Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.;
RT "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the
RT early vertebrate proto-karyotype.";
RL Nature 431:946-957(2004).
RN [2] {ECO:0000313|Ensembl:ENSTNIP00000010278.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR Ensembl; ENSTNIT00000010459.1; ENSTNIP00000010278.1; ENSTNIG00000007470.1.
DR GeneTree; ENSGT00390000016775; -.
DR Proteomes; UP000007303; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR033490; LRP130.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR46669; LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL; 1.
DR PANTHER; PTHR46669:SF1; LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000007303}.
FT REPEAT 138..172
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 683..717
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT COILED 591..645
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1334 AA; 149124 MW; 3D465C008C65508B CRC64;
RNYAVATVKK NETSAAIQSK QALEFDWALN KLDSSVRRTG RITKTLLLRI FHDICRAGYP
SGNQALLLLR SCGTLLPEVP LEERTQLAHH VWEKLRNLGA QYDVSHYNAL LKVYLQNEFK
FSPTDFLAKM EAANIQPNRV TYQRLIAAYC QNGDIEGATT ILGFMKNNHA RAGDMESARN
ILTVMKGAGI DPGPDTYISL LNVYAEKGDM DSFKKTLEAA ESSDCTLMDR DFMQVIFTLA
KAGHQQHLPE VIDRLRHERG YVPDAMNLCL SLITQGLEDT AFYILKTFPT LQSDNLNSEA
SNVGNFFLRH CVTMDTPLEK LGVYCKELQE ANFHASPLIF TLSCALEAKK TALSLALMKM
LKEQGLPTRP HYFWPLLTQH LKDKNTDGVL EVLKGMQELG VAADVDTFHS YILPVFSSTD
AARQALKNAG VSLESEGFVA SEVRKMAVTN LAELYGRLSD PSFPAVDLMN FRSSLSQGFR
KSEDVESMVK ITALLYKDTR FSKDPAGKTS FFLYNLIDSS SEEEVQAQEE KLKAYFTQLK
TQNITIPVNI YKGIRNLLES YHIPELIKYV IALVDPKQQD LNGLTTSAAV AAGAEGKVLM
LEKKLEEHIA ENKPIGSVLK QLIQALCAEE NLQQALQLKE KHEEEMTVGG YVSLINCCRH
DNVEEALSLK REISRKDSST ALDPSKYITL VKALSKNGRI EEAVDILKEM KEKEVAMDDS
HVTMLFHVLN ALAAKGDSEA IRKLQDTVFT LGLTKPSANL CSPLVTSYLD SRDFSGALEA
AMECQNRYRH LPRIHDVIIG LVEKGDTELL QKAMDFVSQT RGEMTMLYDL FFAFLQTGRY
REARKIVETP GLRARPGRLQ WYAERCISTN QMEPLEQMVD MTAKLFECDR DEMYSYILRL
CKETNDSRKA EAVWTKMQEE NVIPRERTLR MVADILRSNG EEVPFEVPET WYAQTQAKQA
AKPKSSEAAH NHGAEYQVRI MSLCKKNKAQ EAYQLLKDAD KKGVDVGLTA YDHVIRGLLS
EGSMEDAMAV KNLAEGQMST FALSDIATSL LIITQSKKGQ CADALASFRA MLAQERLPSQ
LAVTRLVQAL GSSGDVEGIR SVESLMKSLG TALNLSSMVF VNNTALAHIK NGDVGSAVEL
LEEVYTSPGS TSPSMSFVFR KVLEDGNEEA VDKLSAMAER LANHFACYRP ASDLFLQLLD
MDKMEDAKFM LARCNAVAEQ RDVLVSYMAG KAQLPGQSPL HSATLTALPN FTEKELLYSY
LMKCHCLAVV DQDFLSAKAL YEQMQTEGVP ADELSLKRLA VLYRNHGEAA PFPEPPESFR
FYAEKLRERA DRAQ
//