ID H3D328_TETNG Unreviewed; 1756 AA.
AC H3D328;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=Retinoic acid induced 1 {ECO:0000313|Ensembl:ENSTNIP00000014916.1};
OS Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon
OS nigroviridis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon.
OX NCBI_TaxID=99883 {ECO:0000313|Ensembl:ENSTNIP00000014916.1, ECO:0000313|Proteomes:UP000007303};
RN [1] {ECO:0000313|Proteomes:UP000007303}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15496914; DOI=10.1038/nature03025;
RA Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N.,
RA Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S.,
RA Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C.,
RA Salanoubat M., Levy M., Boudet N., Castellano S., Anthouard V., Jubin C.,
RA Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L.,
RA Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P.,
RA Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C.,
RA McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R.,
RA Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D.,
RA Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W.,
RA Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.;
RT "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the
RT early vertebrate proto-karyotype.";
RL Nature 431:946-957(2004).
RN [2] {ECO:0000313|Ensembl:ENSTNIP00000014916.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR STRING; 99883.ENSTNIP00000014916; -.
DR Ensembl; ENSTNIT00000015118.1; ENSTNIP00000014916.1; ENSTNIG00000011956.1.
DR GeneTree; ENSGT00940000156922; -.
DR HOGENOM; CLU_002579_1_0_1; -.
DR InParanoid; H3D328; -.
DR OMA; KPANYRD; -.
DR TreeFam; TF331317; -.
DR Proteomes; UP000007303; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR034732; EPHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR14955; RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20; 1.
DR PANTHER; PTHR14955:SF6; RETINOIC ACID-INDUCED PROTEIN 1; 1.
DR Pfam; PF13771; zf-HC5HC2H; 1.
DR PROSITE; PS51805; EPHD; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000007303};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 1647..1753
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT REGION 1..60
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 113..156
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 181..223
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 258..328
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 399..448
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 496..612
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 646..1074
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1108..1190
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1323..1407
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1578..1630
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 126..147
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 401..415
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 496..525
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 541..560
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 561..597
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 649..671
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 683..703
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 763..784
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1034..1074
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1133..1148
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1340..1373
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1578..1597
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1756 AA; 191377 MW; B7F7655492B46B68 CRC64;
KDCFFFPAHP GYGPGNGSGN GSSAPSQAKK AFRGSKVPTP HPSQHLPGPG GYSNHMGPGN
YSAQYMSEGH LQQKWEDQAQ IAQYDQEMVG RLEAAGTPAP GSSQYVDQNI LSHSQTQCHQ
PSTPAYTSPQ HPPHPTNPAP PPLMYPQSHM HYPQHSPSPL PYIEKCNTVP HCYKGYSIPP
SSPYSRQMSS HSKLNQGGYR SGQNNYSYQP PPSRGFEQQS SLQAMANPQE THTKYPHYNQ
AQQNYCLSDL SVRSPEQYYQ TCSPSSSHSP ARSVGRSPSY SSTPSPLMTN PESFQYGQPP
MTPGAASSSS TSSAGMQDQV GNNSMLMPLR SHASPNVQHA ASHSFTTTPQ VPSMKERFSE
KLLSNPSLWS LNALTSQVEN ISNNVQQLLL SEALVASKKG NKRNTGGSNC SAGGASSKKG
EEYKSPPYPD GGASMVGGTM QDPYSTPQHQ SLTMELHEGG YSSSSDEQLD RGYYYCGQSR
SPAQVPSNIQ LNLDTASSCS MTSPDDMSTR SGDSGLHTFT PDISRCQSGL GGDDINTPLK
SLSDERSPTS ITISSPMKQE RDSPSDLHHI NMSVKENFEE SAWRDKPSDK EEATLKNPDG
DTIQSSENLE KWSDEKKYSA LYSKINKSVT EKSYCYKEPA YQEVMNQEMQ PDALKSDSPT
TSDSSVKTLP FISRDDSPPH QYATERGDQS ENTFPTQADS EESNSGQRVK KCEEDEDVLV
GGEDTGEEEE DEIQKQTHHS LSPPLSTDGR EELLEEEKVS LSTTEKYTNN RDGTEQSLPD
LNNKIERQSP ERDSDTDSAG VLVHSNAAVA DTPPSPKKGD EDMEPGISCA SAVTPMAKPE
PLAPSAHALD LPAKVEQHMK RKPGPKPGSK SVLKLGPKSG QKPGPKSGVK PGSKASPKPG
PKAGAKPGPK TAAKPAVQVE PEILLKIETP AKRKPGPKSG SKPGAKSGSK SGSKLAKPAL
KPGPKPGTKP GPKAADGLPL ADTAPVKTSV GRPKGSVSKI KLVQPEETIQ SMPGLQGRGR
KSPKVPQESQ DVAPVIQEEK KANHDVKLLE ESKNMVLRSR KPSQEKIAKE KEKIKEGDIL
PPMLADIKTI KATDVLADSP AQLSLVNNTE HLFPEQSGEK TSAQLKRKPS LKVSATPVKK
KRGPKPKTKS AKTPHEQVGQ LIPGSKRKRG PPKKTSVVSS PPKDSFPSIS EIDITSDVPV
ASHCPTKTKV LPPRKGRGQK YEAMVQKITS PGSKKHLSIS QMDSHLGVEV STEKILSTAE
AAVEVGAQEK WTNQASDLVN SAGTKSNKMK RKRWDLVEST DASVAVLDAE SLIVTTPRLA
KQRAIKNNHE MHLKQRRKKR KDQPAPEDTD TVKEMDTKIK EQKQEEKSKR GRKPSANVTK
KKSKASPEQM PVKPVKVHKK PGPKPGMKDA MEVIEAVVRA AGDEKGELER REEEDKEKAC
IVGPVVTVSE KQPETISMKR IRCKLAHQNS TLSFCPYVRI NNSRDFSSWC AIVNKPDDAV
IFQRRRKKGI LRMRNPFTVA KGVPHSVAMV QGPSVEKNQT DSCLTCSLCG KPANYRDLGD
LCGPYYAEEN IPRKLLTIKH PEHLRNESQK TDDGHSGNDE VPGCSSSEGA EGGAEKDGPE
TSTQEGPRRL TLQERLRRMR QLQAGGTRSP SDPEGKDSML QRLRVQAEAN EHWTHENCAI
WTKGIIMVAG RLYGLKEAAN KSAQTSCYKC QIVGASLSCC WRGCSHKYHY VCAKEIGCTF
HEDDFSIKCP KHEVIK
//
