GenomeNet

Database: UniProt
Entry: H3SK80_9BACL
LinkDB: H3SK80_9BACL
Original site: H3SK80_9BACL 
ID   H3SK80_9BACL            Unreviewed;       301 AA.
AC   H3SK80;
DT   18-APR-2012, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 1.
DT   24-JAN-2024, entry version 46.
DE   SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EHQ60535.1};
GN   ORFNames=PDENDC454_19810 {ECO:0000313|EMBL:EHQ60535.1};
OS   Paenibacillus dendritiformis C454.
OC   Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX   NCBI_TaxID=1131935 {ECO:0000313|EMBL:EHQ60535.1, ECO:0000313|Proteomes:UP000003900};
RN   [1] {ECO:0000313|EMBL:EHQ60535.1, ECO:0000313|Proteomes:UP000003900}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C454 {ECO:0000313|EMBL:EHQ60535.1,
RC   ECO:0000313|Proteomes:UP000003900};
RX   PubMed=22461558; DOI=10.1128/JB.00158-12;
RA   Sirota-Madi A., Olender T., Helman Y., Brainis I., Finkelshtein A.,
RA   Roth D., Hagai E., Leshkowitz D., Brodsky L., Galatenko V., Nikolaev V.,
RA   Gutnick D.L., Lancet D., Ben-Jacob E.;
RT   "Genome Sequence of the Pattern-Forming Social Bacterium Paenibacillus
RT   dendritiformis C454 Chiral Morphotype.";
RL   J. Bacteriol. 194:2127-2128(2012).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|ARBA:ARBA00009437}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EHQ60535.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AHKH01000065; EHQ60535.1; -; Genomic_DNA.
DR   RefSeq; WP_006678452.1; NZ_AHKH01000065.1.
DR   AlphaFoldDB; H3SK80; -.
DR   STRING; 1131935.PDENDC454_19810; -.
DR   PATRIC; fig|1131935.3.peg.4116; -.
DR   OrthoDB; 8479357at2; -.
DR   Proteomes; UP000003900; Unassembled WGS sequence.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd05466; PBP2_LTTR_substrate; 1.
DR   Gene3D; 3.40.190.290; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR30126:SF40; HTH-TYPE TRANSCRIPTIONAL REGULATOR GLTR; 1.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000003900};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          8..62
FT                   /note="HTH lysR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50931"
SQ   SEQUENCE   301 AA;  34459 MW;  414C2AD0942C210B CRC64;
     MIELLEGRVM KTFIAVMEEK SFSRAADRLG YVQSTVTTHI QSLEQACKQK LFHRLPRGVK
     PTPAGEKMMK YAYQFVHLGS SIEEAMNELE QPKGTVYLRM QESFFLTRFS SFMPYFVNKY
     PEVKLRIEAG FYQDILDHVL EHAIDFGMVP RDPQRHDIVF YPLVEEKLIF IASRALMREV
     ETEGLQRLSQ EVLISFGTDC LYHTQANQAL QEAGIAVKEA LELPSLDMIK QSVKCGSGFA
     LIPEIAVQAE LVSGEFDVLP IRSDIRSTHG MIVHKSRELS YPARLLLSEW TEHSNVQSLY
     F
//
DBGET integrated database retrieval system