ID H5T9D9_9ALTE Unreviewed; 1298 AA.
AC H5T9D9;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=ATP-dependent helicase HrpA {ECO:0000313|EMBL:GAB54916.1};
DE EC=3.6.4.13 {ECO:0000313|EMBL:GAB54916.1};
GN Name=hrpA {ECO:0000313|EMBL:GAB54916.1};
GN ORFNames=GPUN_0778 {ECO:0000313|EMBL:GAB54916.1};
OS Glaciecola punicea ACAM 611.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Alteromonadaceae; Glaciecola.
OX NCBI_TaxID=1121923 {ECO:0000313|EMBL:GAB54916.1, ECO:0000313|Proteomes:UP000053586};
RN [1] {ECO:0000313|EMBL:GAB54916.1, ECO:0000313|Proteomes:UP000053586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACAM 611 {ECO:0000313|EMBL:GAB54916.1,
RC ECO:0000313|Proteomes:UP000053586};
RX PubMed=22628500; DOI=10.1128/JB.00463-12;
RA Qin Q.-L., Xie B.-B., Shu Y.-L., Rong J.-C., Zhao D.-L., Zhang X.-Y.,
RA Chen X.-L., Zhou B.-C., Zhanga Y.-Z.;
RT "Genome sequence of proteorhodopsin-containing sea ice bacterium Glaciecola
RT punicea ACAM 611T.";
RL J. Bacteriol. 194:3267-3267(2012).
RN [2] {ECO:0000313|EMBL:GAB54916.1, ECO:0000313|Proteomes:UP000053586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACAM 611 {ECO:0000313|EMBL:GAB54916.1,
RC ECO:0000313|Proteomes:UP000053586};
RX PubMed=25009843;
RA Qin Q.-L., Xie B.-B., Yu Y., Shu Y.-L., Rong J.-C., Zhang Y.-J.,
RA Zhao D.-L., Chen X.-L., Zhang X.-Y., Chen B., Zhou B.-C., Zhang Y.-Z.;
RT "Comparative genomics of the marine bacterial genus Glaciecola reveals the
RT high degree of genomic diversity and genomic characteristic for cold
RT adaptation.";
RL Environ. Microbiol. 16:1642-1653(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAB54916.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BAET01000007; GAB54916.1; -; Genomic_DNA.
DR RefSeq; WP_006003490.1; NZ_BAET01000007.1.
DR STRING; 56804.BAE46_00255; -.
DR eggNOG; COG1643; Bacteria.
DR OrthoDB; 9805617at2; -.
DR Proteomes; UP000053586; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR CDD; cd17989; DEXHc_HrpA; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR024590; HrpA_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR010222; RNA_helicase_HrpA.
DR NCBIfam; TIGR01967; DEAH_box_HrpA; 1.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF83; PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF11898; DUF3418; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:GAB54916.1};
KW Hydrolase {ECO:0000313|EMBL:GAB54916.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000053586}.
FT DOMAIN 81..244
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 266..436
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 1298 AA; 147579 MW; 53114D8CB4667EF1 CRC64;
MTISTSLSTQ LDKCKLQDQL ALKRRWSKLN TIKDSEKKEL AVLAWQESLE AAQQKLSVRT
NVKVFIEYPS LPVSDKKEDI KALIAKHQVV IIAGETGSGK TTQLPKMCLE LGLGRKGMIG
HTQPRRLAAR SVAARIAEEL KTSVGQVVGC KVRFSEQVSD ISLIKLLTDG MLLAEMQQDK
LLSQYDTIII DEAHERSLNI DFLLGYLKRI LPERPDLKII ITSATIDPQR FSEHFNHAPI
VEVSGRSFAV DIQYRNYVEQ QQAEDQIEAI SLAVEELFAH GRGDILVFLS SEREIRETQQ
ALQKKQYTHT EVIPLYARLS ASDQQKIFHP QGRRRIVLST NVAETSLTVP GIKYVIDTGL
VRMSRYSHRL KVQRLPIEAI SQASAKQRAG RCGRTSKGIC IRLYSEQDFL SRPEFTDPEI
TRTHLSSVIL QMLNLGLGEI QQFEFIQPPQ EKFITDGVRL LQELQAVDIK KGRLYLNEQG
RKMARFPLDP KYARMLLAAG ETDCVSEVMV ITAGLSVQDP RERPHDKQQK ADLAHAEFAD
KDSDLISLLN LYQAFKAQQK ELTQNQLRKW CLQHFVHYQR MREWQDITHQ VKHMLVSVGL
RLNKEQADYQ KIHTAMAIGL LSQIGLKDLN HEYLGARNSK FKIFPGSALF KSQPKWIMAG
ELVETTNLYA RQVAKIETQW IEAIAQHLLN KNYVEAHWSK KRGAVMAYMN ALLFGLPIVS
KRLVNYSSVD HVHTRQLFIR HALVQGETKL QYAFLSSNQA LVEDIQLLEK KTRRRDILAD
EEDLVAFYET RVDEHVCSEQ SFTKWWRNAS QRTPDLLNFE KHELLKRDAS DITEAAFPDT
WHQGSLVLAL EYQFEPNKEL DGIILLIPIE LLNQVKNIGF DWLVPGLRHE LLVALIKSLP
KRLRRNFVPA PDYANACLHE LQGTDQQGNV LSITQAFALK LFKMSGVALS SDDFSIEGLD
SHLTINFKVV DNKGQQVAVN KSLPALKQQL HKQLKQTIDK VVTSDIEKQD ISSFEAENLP
TVYTQSQSGF EVKAYPALSA AGKQVDIKLF TSKAEAENAH KLGMIMLIKK NVPSPMKYLQ
EKLPNKAKLS LYFNPFGQIQ KLIDDIIDAS VDDLLKAFGG PSNIRSQHEY KKALEVVRIK
LNAKALDIAK QVETGLAIAN QIQKHCKGSI PLPLVAHVGH IKQHLSELVY KGFVFDFGLA
RLPDWNRYLK GLLQRCEKLK VDASRDRLNQ LEIDKALNLF ASTQTQLDRQ LRKSNELALV
KEMVEEFRIS LYAQQLGTKY PISLKRISIK LQEIAITS
//
