ID H6T2S7_CHASI Unreviewed; 1375 AA.
AC H6T2S7;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
GN Name=rpoC2 {ECO:0000313|EMBL:AEZ49474.1};
OS Chamaedorea seifrizii (Bamboo palm).
OG Plastid {ECO:0000313|EMBL:AEZ49474.1}.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Arecaceae; Arecoideae;
OC Chamaedoreeae; Chamaedorea.
OX NCBI_TaxID=77339 {ECO:0000313|EMBL:AEZ49474.1};
RN [1] {ECO:0000313|EMBL:AEZ49474.1}
RP NUCLEOTIDE SEQUENCE.
RA Givnish T.J., Ames M., McNeal J.R., McKain M.J., Steele P.R.,
RA dePamphilis C.W., Graham S.W., Pires J.C., Stevenson D.W., Zomlefer W.B.,
RA Briggs B.G., Duvall M.R., Moore M.J., Heaney J.M., Soltis D.E.,
RA Soltis P.S., Thiele K., Leebens-Mack J.H.;
RT "Assembling the Tree of the Monocotyledons: Plastome Sequence Phylogeny and
RT Evolution of Poales.";
RL Ann. Mo. Bot. Gard. 97:584-616(2010).
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DR EMBL; HQ182949; AEZ49474.1; -; Genomic_DNA.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0009536; C:plastid; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd02655; RNAP_beta'_C; 1.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.150.390; -; 1.
DR Gene3D; 1.10.1790.20; -; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR HAMAP; MF_01324; RNApol_bact_RpoC2; 1.
DR InterPro; IPR012756; DNA-dir_RpoC2_beta_pp.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR NCBIfam; TIGR02388; rpoC2_cyan; 1.
DR PANTHER; PTHR48355; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR PANTHER; PTHR48355:SF1; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 2.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Plastid {ECO:0000313|EMBL:AEZ49474.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 97..161
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF05000"
FT DOMAIN 176..368
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04998"
FT DOMAIN 1184..1270
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04998"
FT NON_TER 1375
FT /evidence="ECO:0000313|EMBL:AEZ49474.1"
SQ SEQUENCE 1375 AA; 156929 MW; 0EA6E647A051C735 CRC64;
MEVLMAERAD LVFHNKVING TAMKRLISRL IDHFGMAYTS HILDQVKTLG FQQATATSIS
LGIDDLLTIP SKGWLVQDTE QQSFFFEKHH HYGNVHAVEK LRQSIEIWYA TSEYLRQEMN
PNFRMTDPSN PVHLMSFSGA RGNASQIHQL VGMRGLMSDP QGQMIDLPIQ SNLREGLSLT
EYIISCYGAR KGVVDTAVRT SDAGYLTRRL VEVVQHIIVR RTDCGTIRGI SVSPRNGMTE
KIFVQTLIGR VLADNIYMGI RCIAARNQDI GIGLVNRFIT FRAQPIYIRT PFTCKSASWI
CQLCYGRSPT HGDLVELGEA VGIIAGQSIG EPGTQLTLRT FHTGGVFTGD TAEHVRAPSN
GKIKFNEDLV YPTRTRHGHP AFLCSIDLYV TIETRDILHN VNIPPKSLIL VQNEQYVESE
QVIAEIRAGT STFRFKEKVR KHIYSESEGE MHWSTDVHHA SEYTHGNVHL LPKTSHLWIL
AGGPCRSSIV SFSLHKDQDQ MNVRSFSFEE RYIFDLSMTN HRVRHKLLDT SGKKDREILD
YSRPDRIISN GHWNFIYPSI LQENSDFLAK KRRNRFIIPL QYDQERDKEL MPCFGISIEI
PINGILRRNS ILAYFDDPRY RRNSSGITKY GTIEVDSIIK KENLIEYRGA KEFSPKYQKV
ARFFFILEEV HILPGSSFIM VQNNSIIGVD TQLALNTRSR VGGLVRVERK KKSIELKIFS
GDIHFPGERD KISRHSGILI PPETEKKNSK KSKKFKNWIY VQRITPTKKK YFVSVRSVVT
YEIADGINLA TLFPRDLLQE KDNVQLRVVN YILYGNGKSI RGIYHTSIQL VRTCLVLNWD
QEKNGSIEEV HASFVEVRTN DLIRDFIRIE LVKSTISYTG KRYDRASSVL ISDNELDRTN
INPFYSKAKI QSLTQHQVTL GIGTLLNRNN ECQSLIILSS SNCSRIRPFN GLKYNNVTKE
SDPIIQIKDL LGPLGTIVPK IANMFSSYYL ITHNHILLKK YLLRDNFKQT FQVLKYCLID
ENRGIYNPDP CVNIILNPFH LNWCFLHHDY CEETFTIISL GQFICENVCL FKYESHVKKS
GQILIVHVDS LVIRSAKPYL ATPGATVHSH YGEILYEGDT LVTFIYEKSR SGDITQGLPK
VEQILEVRSI DSISMNLEGR VEGWSERIQR ILGIPWGFLI GAELTIAQSR ISLVNKIQKV
YRSQGVQIHN RHIEIIVRQV TSKVLVSEDG MSNVFLPGEL IGFLRAERAG RALDEAICYR
AILLGITRAS LNTQSFISEA SFQETARVLA KAALRGRIDW LKGLKENVVL GGIIPVGTGF
QKLVHPSRQD KNIHLEIRDI LLHHRELFCS YVQNNFHETN FHETSEQSFT RFNDS
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