ID H8XV56_FLAIG Unreviewed; 588 AA.
AC H8XV56;
DT 16-MAY-2012, integrated into UniProtKB/TrEMBL.
DT 16-MAY-2012, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN Name=rpsA {ECO:0000313|EMBL:CCG53026.1};
GN OrderedLocusNames=KQS_05300 {ECO:0000313|EMBL:CCG53026.1};
OS Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=1094466 {ECO:0000313|EMBL:CCG53026.1, ECO:0000313|Proteomes:UP000007599};
RN [1] {ECO:0000313|EMBL:CCG53026.1, ECO:0000313|Proteomes:UP000007599}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17447 / CIP 109464 / GPTSA100-9
RC {ECO:0000313|Proteomes:UP000007599};
RX PubMed=22582381; DOI=10.1128/JB.00420-12;
RA Barbier P., Houel A., Loux V., Poulain J., Bernardet J.F., Touchon M.,
RA Duchaud E.;
RT "Complete Genome Sequence of Flavobacterium indicum GPSTA100-9T, Isolated
RT from Warm Spring Water.";
RL J. Bacteriol. 194:3024-3025(2012).
RN [2] {ECO:0000313|Proteomes:UP000007599}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17447 / CIP 109464 / GPTSA100-9
RC {ECO:0000313|Proteomes:UP000007599};
RA Barbier P., Houel A., Loux V., Poulain J., Bernardet J.-F., Touchon M.,
RA Duchaud E.;
RT "Complete genome sequence of Flavobacterium indicum GPTSA100-9T, isolated
RT from warm spring water.";
RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
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DR EMBL; HE774682; CCG53026.1; -; Genomic_DNA.
DR RefSeq; WP_014388154.1; NC_017025.1.
DR AlphaFoldDB; H8XV56; -.
DR STRING; 1094466.KQS_05300; -.
DR KEGG; fin:KQS_05300; -.
DR PATRIC; fig|1094466.5.peg.1040; -.
DR eggNOG; COG0539; Bacteria.
DR HOGENOM; CLU_015805_2_0_10; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000007599; Chromosome.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd00164; S1_like; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF13; 30S RIBOSOMAL PROTEIN S1; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 3.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000007599};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:CCG53026.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 49..112
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 130..196
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 217..285
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 302..372
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 389..459
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 476..541
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 588 AA; 65775 MW; C74027BB5B295851 CRC64;
MAEINKEQQE FLNSFNWHNY AEGIDAIDEK NLQEFEELVT KTFISTGDEE VVEGVVVRLT
DRDAIVDINA KSEGAISLNE FRYNPNLKVG DKVEVLIDVR EDKSGQLVLS HKKARTIKAW
DRVIAANESG EIVNGFVKCR TKGGMIVDVF GIEAFLPGSQ IDVKPIRDYD QYVNKTMEFK
VVKINHEFKN VVVSHKALIE ADIEVQKKEI IGQLEKGQVL EGVVKNITSY GVFIDLGGVD
GLIHITDLSW SRINHPSEVL ELDQKLNVVI LDFDDEKTRI QLGLKQLNAH PWDALDANLK
VGDKVKGKVV VLADYGAFIE VAEGVEGLIH VSEMSWSTHL RSAQDFVKVG DEVEAVILTL
DREERKMSLG IKQMTTDPWT DITAKYPVGS KHTGIVRNFT NFGIFVELEE GIDGLVYISD
LSWTKKIKHP SEFVNVGDKL DVVVLELDVE GRKLSLGHKQ TTENPWDKVE ANFGLGTVHN
GTVTEMVDKG ATVDFGDNVQ GFVPTRHLEK EDGKKLKKGD TAEFKVIEFN KEFKRIVASH
TAIFREEEEK VVKEAEAKVT TSTQAEKSTL GDIDALAELK AKMEKGEK
//
