ID   H8ZXB4_GADMO            Unreviewed;       124 AA.
AC   H8ZXB4;
DT   16-MAY-2012, integrated into UniProtKB/TrEMBL.
DT   16-MAY-2012, sequence version 1.
DT   03-MAY-2023, entry version 28.
DE   SubName: Full=Circadian locomotor output cycles kaput 3 {ECO:0000313|EMBL:AFC93481.1};
DE   Flags: Fragment;
GN   Name=Clock3 {ECO:0000313|EMBL:AFC93481.1};
OS   Gadus morhua (Atlantic cod).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus.
OX   NCBI_TaxID=8049 {ECO:0000313|EMBL:AFC93481.1};
RN   [1] {ECO:0000313|EMBL:AFC93481.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Lazado C., Giannetto A., Nagasawa K., Kamaratunga H., Fernandes J.M.O.;
RT   "Circadian system of Atlantic cod (Gadus morhua).";
RL   Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; JN643706; AFC93481.1; -; mRNA.
DR   AlphaFoldDB; H8ZXB4; -.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0032922; P:circadian regulation of gene expression; IEA:InterPro.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 1.
DR   InterPro; IPR047230; CLOCK-like.
DR   InterPro; IPR036638; HLH_DNA-bd_sf.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013767; PAS_fold.
DR   PANTHER; PTHR46055; CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT; 1.
DR   PANTHER; PTHR46055:SF2; CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT; 1.
DR   Pfam; PF00989; PAS; 1.
DR   SMART; SM00091; PAS; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR   PROSITE; PS50112; PAS; 1.
PE   2: Evidence at transcript level;
KW   Biological rhythms {ECO:0000256|ARBA:ARBA00023108}.
FT   DOMAIN          42..90
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:AFC93481.1"
FT   NON_TER         124
FT                   /evidence="ECO:0000313|EMBL:AFC93481.1"
SQ   SEQUENCE   124 AA;  14034 MW;  7B5270F4352A5D95 CRC64;
     RKMDKSTILQ KSIDFLCKHK EITAQSESSE IRQDWKPAFL SNEEFTQLML EALDGFFIAI
     MTDGNIIYVS ESVTSLLEHL PADLMDQNLL NFLPLGEHSD VYKALSTHAA DPESHGSDYL
     KSKN
//