ID H9WX23_PINTA Unreviewed; 76 AA.
AC H9WX23;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=Alpha-ketoglutarate-dependent dioxygenase AlkB-like domain-containing protein {ECO:0000259|Pfam:PF13532};
DE Flags: Fragment;
GN ORFNames=2_10316_02 {ECO:0000313|EMBL:AFG66566.1};
OS Pinus taeda (Loblolly pine).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Pinopsida; Pinidae; Conifers I; Pinales; Pinaceae; Pinus;
OC Pinus subgen. Pinus.
OX NCBI_TaxID=3352 {ECO:0000313|EMBL:AFG66566.1};
RN [1] {ECO:0000313|EMBL:AFG66566.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=3815 {ECO:0000313|EMBL:AFG66572.1}, 3816
RC {ECO:0000313|EMBL:AFG66564.1}, 3817 {ECO:0000313|EMBL:AFG66563.1},
RC 3818 {ECO:0000313|EMBL:AFG66562.1}, 3819
RC {ECO:0000313|EMBL:AFG66560.1}, 3821 {ECO:0000313|EMBL:AFG66571.1},
RC 3822 {ECO:0000313|EMBL:AFG66566.1}, 3823
RC {ECO:0000313|EMBL:AFG66568.1}, 3824 {ECO:0000313|EMBL:AFG66558.1},
RC 3825 {ECO:0000313|EMBL:AFG66570.1}, 3826
RC {ECO:0000313|EMBL:AFG66559.1}, 3828 {ECO:0000313|EMBL:AFG66567.1},
RC 3830 {ECO:0000313|EMBL:AFG66569.1}, 3831
RC {ECO:0000313|EMBL:AFG66561.1}, and 3832 {ECO:0000313|EMBL:AFG66565.1};
RC TISSUE=Megagametophyte {ECO:0000313|EMBL:AFG66566.1};
RA Neale D.B., Wegrzyn J.L., Lee J.M., Eckert A.J., Liechty J.D.,
RA Stevens K.A., Langley C.H.;
RT "Nucleotide Diversity and Divergence in the Loblolly Pine Gene Space.";
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC Evidence={ECO:0000256|PIRSR:PIRSR604574-2};
CC Note=Binds 1 Fe(2+) ion per subunit. {ECO:0000256|PIRSR:PIRSR604574-2};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; FJ088776; AFG66558.1; -; Genomic_DNA.
DR EMBL; FJ088775; AFG66559.1; -; Genomic_DNA.
DR EMBL; FJ088788; AFG66560.1; -; Genomic_DNA.
DR EMBL; FJ088782; AFG66561.1; -; Genomic_DNA.
DR EMBL; FJ088780; AFG66562.1; -; Genomic_DNA.
DR EMBL; FJ088790; AFG66563.1; -; Genomic_DNA.
DR EMBL; FJ088784; AFG66564.1; -; Genomic_DNA.
DR EMBL; FJ088779; AFG66565.1; -; Genomic_DNA.
DR EMBL; FJ088783; AFG66566.1; -; Genomic_DNA.
DR EMBL; FJ088774; AFG66567.1; -; Genomic_DNA.
DR EMBL; FJ088773; AFG66568.1; -; Genomic_DNA.
DR EMBL; FJ088786; AFG66569.1; -; Genomic_DNA.
DR EMBL; FJ088785; AFG66570.1; -; Genomic_DNA.
DR EMBL; FJ088777; AFG66571.1; -; Genomic_DNA.
DR EMBL; FJ088778; AFG66572.1; -; Genomic_DNA.
DR AlphaFoldDB; H9WX23; -.
DR GO; GO:0051213; F:dioxygenase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.590; Alpha-ketoglutarate-dependent dioxygenase AlkB-like; 1.
DR InterPro; IPR004574; Alkb.
DR InterPro; IPR027450; AlkB-like.
DR InterPro; IPR037151; AlkB-like_sf.
DR PANTHER; PTHR16557; ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED; 1.
DR PANTHER; PTHR16557:SF2; NUCLEIC ACID DIOXYGENASE ALKBH1; 1.
DR Pfam; PF13532; 2OG-FeII_Oxy_2; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
PE 4: Predicted;
KW Dioxygenase {ECO:0000256|ARBA:ARBA00022964};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Iron {ECO:0000256|PIRSR:PIRSR604574-2};
KW Metal-binding {ECO:0000256|PIRSR:PIRSR604574-2};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002}.
FT DOMAIN 1..74
FT /note="Alpha-ketoglutarate-dependent dioxygenase AlkB-like"
FT /evidence="ECO:0000259|Pfam:PF13532"
FT BINDING 44
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000256|PIRSR:PIRSR604574-2"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AFG66566.1"
SQ SEQUENCE 76 AA; 8621 MW; C3CC6E9BDE2398E6 CRC64;
VSFSVGDSAE FLYGTERDID KAEKILLESG DVLIFGGESR HVFHGISHVN PHTSPKWLNQ
ETRLRPGRLN LTFRQI
//
