ID I0Z7J0_COCSC Unreviewed; 502 AA.
AC I0Z7J0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=CWF21 domain-containing protein {ECO:0000259|SMART:SM01115};
GN ORFNames=COCSUDRAFT_64574 {ECO:0000313|EMBL:EIE26609.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE26609.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE26609.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE26609.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the CWC21 family.
CC {ECO:0000256|ARBA:ARBA00005954}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE26609.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AGSI01000002; EIE26609.1; -; Genomic_DNA.
DR RefSeq; XP_005651153.1; XM_005651096.1.
DR AlphaFoldDB; I0Z7J0; -.
DR STRING; 574566.I0Z7J0; -.
DR GeneID; 17044619; -.
DR KEGG; csl:COCSUDRAFT_64574; -.
DR eggNOG; KOG1869; Eukaryota.
DR OrthoDB; 25337at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd21373; cwf21_SRRM2-like; 1.
DR Gene3D; 6.10.140.420; -; 1.
DR InterPro; IPR013170; mRNA_splic_Cwf21_dom.
DR PANTHER; PTHR36562:SF5; RHODANESE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR36562; SERINE/ARGININE REPETITIVE MATRIX 2; 1.
DR Pfam; PF08312; cwf21; 1.
DR SMART; SM01115; cwf21; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000007264}.
FT DOMAIN 55..100
FT /note="CWF21"
FT /evidence="ECO:0000259|SMART:SM01115"
FT REGION 1..56
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 95..117
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 137..502
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 9..29
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 137..226
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 235..266
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 277..291
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 295..311
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 331..346
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 378..427
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 436..465
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 466..502
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 502 AA; 55740 MW; 6362D94EE1C38F73 CRC64;
MYNGIGILTP RGSGTSGYVQ TNKFNLRGPP QQKAQDLRNA PDSSQAYKKP DQGILDHNRR
REIELKVVQM ADALEEQGYS AEEIEQETTL LRKQLEAEGL EQRQDKPATE THEIAERKMK
ELEKLRDAWG IDKDAVEGQA FDRELQEQKK QDRIAEREAK EKERKAKAKE AEKKRAKEEK
RRAKEAKKKE KADKEEAERM RKEGEERVRA LEEARAQRRK DAAEANASRP AGDSPPPRED
ARHSRKRHAE DTAPRAGKRH VAEQASPHVG AERWVPRPAT PDDDEAADAD AARQTSADGP
STGILSPTPS VARSRPPSPS PAKLRAEAKE PPSPRPPSPP RNGRPQKSPP ARTRSRRDSP
SPPRRRQPRS TVAASPPRRD TRGRDRSPRR DRDERRYGGG RGRDDRDDRR DRGRDRDAGR
DGDMRRGGAR SLSPAARREP ARREAETGVA SGRRDGRKEP PRVRRSASSS RTSSSSGSGS
SSSSGSSTGT SSSSGSSGSD SD
//
