ID I0ZAA9_COCSC Unreviewed; 412 AA.
AC I0ZAA9;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=RNA-binding domain-containing protein {ECO:0000313|EMBL:EIE27578.1};
GN ORFNames=COCSUDRAFT_26804 {ECO:0000313|EMBL:EIE27578.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE27578.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE27578.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE27578.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE27578.1}.
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DR EMBL; AGSI01000001; EIE27578.1; -; Genomic_DNA.
DR RefSeq; XP_005652122.1; XM_005652065.1.
DR AlphaFoldDB; I0ZAA9; -.
DR STRING; 574566.I0ZAA9; -.
DR GeneID; 17045593; -.
DR KEGG; csl:COCSUDRAFT_26804; -.
DR eggNOG; KOG4205; Eukaryota.
DR OrthoDB; 3127428at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR48032:SF6; FI20028P1; 1.
DR PANTHER; PTHR48032; RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6; 1.
DR Pfam; PF00076; RRM_1; 3.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007264};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 48..124
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 134..210
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 287..365
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 364..412
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 412 AA; 44669 MW; 224F37AE19F32D53 CRC64;
MLVHGERVIS QQHQGQPQPP AQMHGGELSG MNGMSNGDGM MQSEVESRKL VILGLPWDTT
EASLEQHFSQ FGPLQEVVIM KDRTTGKSRG FGFVTFFRAM DASCAASQEH VVDGRRCEAK
YALPRGGGPA PRTTRIFVAR IPLSVNDAQF RQYFEQYGSV QDAYMPKDAT KQSHRGIGFV
TFANADSVEA VMSSPHSMNG QELAIDRATP KDKPSDSAGN DFNPYQAVAN GNGRTTAYSS
GGGSSSVVAA FEGANGGQAA NSGGSGSGEL FQPMRGDGAS IDTRSGPRIF VGKLNKETTE
NDVKEYFTRF GYVMDVYLPR DKVNRSEHRG FGFVTFETDG AVLRIHAHGQ HQIKGSVVAI
DSAVPRREEG TRTDDDVSTS SMQVMDLGGD DLSLGPARNH PQERMRHGYK PY
//
