ID I1GRU0_BRADI Unreviewed; 461 AA.
AC I1GRU0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE RecName: Full=TFIIS N-terminal domain-containing protein {ECO:0000259|PROSITE:PS51319};
GN Name=100842292 {ECO:0000313|EnsemblPlants:KQK14963};
GN ORFNames=BRADI_1g19810v3 {ECO:0000313|EMBL:KQK14963.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:KQK14963};
RN [1] {ECO:0000313|EMBL:KQK14963.1, ECO:0000313|EnsemblPlants:KQK14963}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK14963.1,
RC ECO:0000313|EnsemblPlants:KQK14963};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK14963.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK14963.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK14963}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK14963};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00649}.
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DR EMBL; CM000880; KQK14963.1; -; Genomic_DNA.
DR RefSeq; XP_010234825.1; XM_010236523.2.
DR AlphaFoldDB; I1GRU0; -.
DR STRING; 15368.I1GRU0; -.
DR EnsemblPlants; KQK14963; KQK14963; BRADI_1g19810v3.
DR GeneID; 100842292; -.
DR Gramene; KQK14963; KQK14963; BRADI_1g19810v3.
DR KEGG; bdi:100842292; -.
DR eggNOG; KOG0265; Eukaryota.
DR HOGENOM; CLU_024836_2_0_1; -.
DR InParanoid; I1GRU0; -.
DR OMA; SMDYWLG; -.
DR OrthoDB; 393461at2759; -.
DR Proteomes; UP000008810; Chromosome 1.
DR ExpressionAtlas; I1GRU0; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR InterPro; IPR044805; MD26A/B-like.
DR InterPro; IPR003617; TFIIS/CRSP70_N_sub.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR PANTHER; PTHR46554; MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED; 1.
DR PANTHER; PTHR46554:SF3; OS07G0642600 PROTEIN; 1.
DR Pfam; PF08711; Med26; 1.
DR SMART; SM00509; TFS2N; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR PROSITE; PS51319; TFIIS_N; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00649}; Reference proteome {ECO:0000313|Proteomes:UP000008810}.
FT DOMAIN 131..206
FT /note="TFIIS N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51319"
FT REGION 68..87
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 216..235
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 263..320
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 336..375
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 423..461
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 263..281
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 298..320
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 354..375
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 432..461
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 461 AA; 50112 MW; 9CC6B2840EF9792C CRC64;
MAPPPSTDCW AAFFRAAGDG IFDLIEAAID VAAADRPDAL RARRDAIAEH LYTATLAVSG
APAAAAGAAA RPPAPVPAVE PRTEALQQKQ QQLLLPEGAA SVPSLCSSDR AEAITDDGAP
RRGEGDDAVA AEAERIKAAL VNYHEKSEGA LLELLRRLQQ LEFTVHTLKV TEIGKTVTNL
RKHNSKQIRQ LVRLLVGGWK LIVDDWMSSG GDAIVDHTPQ SMHPSNLEQE DRGLSSPAMD
EGALLATLST SIGLSEDNQN SRLFHGIDDG NTRNSGQRNL GCQEPIRRPP LPMAQQYDPD
QSWRQEQSAA RQSRPQELTN GQTKEQFIAA MLARPPASNA KPGPVRPQVR SKPHQDASPA
QGRPQSVPSD KQVGNYDANS VRAKLGLAKN AKLEMSNNSK LEVAKRKLQE GYQEFDNAKK
QKCIQMVDPQ DVRKQGNRSG QPSGKPWNSS NTNNNRNWSS R
//
