ID I1L0F0_SOYBN Unreviewed; 572 AA.
AC I1L0F0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE RecName: Full=AMP-dependent synthetase/ligase domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100787691 {ECO:0000313|EnsemblPlants:KRH36797};
GN ORFNames=GLYMA_09G024500 {ECO:0000313|EMBL:KRH36797.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH36797};
RN [1] {ECO:0000313|EMBL:KRH36797.1, ECO:0000313|EnsemblPlants:KRH36797}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH36797};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH36797.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH36797}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH36797};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH36797.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH36797.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000842; KRH36797.1; -; Genomic_DNA.
DR RefSeq; XP_003535086.2; XM_003535038.3.
DR AlphaFoldDB; I1L0F0; -.
DR SMR; I1L0F0; -.
DR STRING; 3847.I1L0F0; -.
DR PaxDb; 3847-GLYMA09G02840-1; -.
DR EnsemblPlants; KRH36797; KRH36797; GLYMA_09G024500.
DR GeneID; 100787691; -.
DR Gramene; KRH36797; KRH36797; GLYMA_09G024500.
DR KEGG; gmx:100787691; -.
DR eggNOG; KOG1177; Eukaryota.
DR InParanoid; I1L0F0; -.
DR OMA; YFCGRAN; -.
DR OrthoDB; 37583at2759; -.
DR Proteomes; UP000008827; Chromosome 9.
DR ExpressionAtlas; I1L0F0; baseline and differential.
DR GO; GO:0031956; F:medium-chain fatty acid-CoA ligase activity; IBA:GO_Central.
DR GO; GO:0006631; P:fatty acid metabolic process; IBA:GO_Central.
DR CDD; cd04433; AFD_class_I; 1.
DR Gene3D; 3.30.300.30; -; 1.
DR Gene3D; 3.40.50.12780; N-terminal domain of ligase-like; 1.
DR InterPro; IPR025110; AMP-bd_C.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig_com.
DR InterPro; IPR042099; ANL_N_sf.
DR PANTHER; PTHR43201:SF36; 2-SUCCINYLBENZOATE--COA LIGASE, CHLOROPLASTIC_PEROXISOMAL; 1.
DR PANTHER; PTHR43201; ACYL-COA SYNTHETASE; 1.
DR Pfam; PF00501; AMP-binding; 1.
DR Pfam; PF13193; AMP-binding_C; 1.
DR SUPFAM; SSF56801; Acetyl-CoA synthetase-like; 1.
DR PROSITE; PS00455; AMP_BINDING; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 37..410
FT /note="AMP-dependent synthetase/ligase"
FT /evidence="ECO:0000259|Pfam:PF00501"
FT DOMAIN 461..551
FT /note="AMP-binding enzyme C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13193"
SQ SEQUENCE 572 AA; 63729 MW; AA1C44E674519A53 CRC64;
MHLIQTTPHF HFMANYSHSH ICQCLSGLLN FRRHFSVIIA EKRHKTGQEL AEEVLSLAQG
LLHLGLTPGQ VVAISAYNSE RYLEWLLAIA FVGGIAAPLN YRWSFEEARL AINAVNPLML
VTDESSYARY SKLQQNDVPS LKWHILLDSP SSDFTKWNVL TAEMLKRHPV KLLPFDYSWA
PEGAVIICFT SGTTGKPKGV TLSHGALIIQ SLAKIAIVGY NEDDVYLHTA PLFHIGGLSS
AMTMLMVGGC HVLMPKFDAE SAVDAIEQYA VTSFITVPAI MASLISIIRH KETWQGGDTV
KKILNGGGSL SHELIKDTSI FFHKAKLISA YGMTETCSSL TFLTLYEPMH ETTSQSLQAF
GVAGSKLIHQ QQGVCVGKAA PHIELKISAD ASGHIGRILT RGPHIMLRYW DQTLTNPLNP
NNEAWLDTGD IGSIDHYGNL WLLGRTNGRI KSGGENIYPE EVEAILQQHP GIASVVVVGI
PDAHLTEMVA ACIQLRENWQ WSEQLSASNE EFLLSRKNLY QYCLENHLSR FKIPKTFIVW
RKPFQLTTTG KIRRDQVRKE VMSQLQSLHS NL
//
